| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0797 |
|---|
| Symbol | |
|---|
| ID | 6314479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 831523 |
|---|
| End bp | 834525 |
|---|
| Gene Length | 3003 bp |
|---|
| Protein Length | 1000 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642643172 |
|---|
| Product | protein of unknown function DUF450 |
|---|
| Protein accession | YP_001916972 |
|---|
| Protein GI | 188585427 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
|---|
| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00985204 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGTTG ATCACAGTGA GATCTCCCTT GAAAAAACTA TAGAATCTTA TCTAATAAAC
CATGGTGGAT ATATTAAAGG TGACCCCTCT GAATTTGCTA GGGAAAAAGC ACTATTTCCC
AAAACCTTTA TAGCATTCAT CAAAGATACC CAACCAGATA AGTGGGAAAA ACTAGAGAGA
ATGCACGGTG ATCAAGTAGA AGAAAAAGTT ATCTACCGTC TAACTAGAGA ACTTTCACAG
CGGGGAATGT TAGATGTACT GAGAAAAGGG ATTACTGATT TTGGTGTAAA ACTAACAACA
GCTTATTTTC CACCAGCCAG TGGATTAAAT CCTGAAATAC AAGAACTATA TGATAAAAAC
AGGTTAACAG CTACCAGACA AGTGAGATAT TCTACTAAGA ATGAAAACTC TTTAGATTTA
GTGTTGAGCA TTAATGGTTT ACCAGTTGCA ACAGCAGAGC TTAAAAACCC CTCCACCGGT
CAGACATTCC AAGATGCAAA AAAACAATAC AAAGAAGACC GTGACCCAAA AGAACCAATT
TTCCAGTTTA AAAAACGAAC CCTCGTTCAT TTTGCTTTGG ATACTGATGA AGTATATATG
ACAACAAAAC TTGCAAAAGG GAATACTGTA TTTCTCCCCT TTAACAAAGG AAAAGATGGC
GGTAAAGGGA ATCCTGAAAA TCCTAATGGA TACCGGACAG CTTATTTGTG GGAAGAAATA
TGGGAAAAAG ATACCTGGAT GAAGATTGTC TCCCGATTTA TGAACTTAGA AGTTAAAAAA
GAAGAAAAGG ATGGCAAACA GATTACTAAG GAAAACATTA TCTTTCCTAG ATATCACCAA
TTAGAAGCAG TGTTTAATAT AACAAATGAT GCTCAAAAGA GAGGACCAGG TAAAAACTAT
TTAGTTCAAC ACTCCGCAGG AAGTGGAAAA AGTTTAACCA TAGGGTGGCT TGCTCATCGA
TTATCAAATT TACATGATGA CAATAATGCT CCTGTCTTTA ACAGTGTGAT AGTTATTACC
GATCGTGTTG TCCTTGATAA ACAGCTTCAA GAAACTATAT ATCAGATTGA CCATCAACAG
GGAGTAGTAG AGCGGATAGA TAGACATTCA TCTCAGTTAA AGGATGCCCT TGAAAAAGGA
AAGAAAATAA TAATCACCAC ACTGCAAAAA TTCCCTGTGA TATTAGATGA AATTAAAGGC
TTGCCTGAAA GAAATTACGC GGTAATAGTA GATGAAGCCC ACAGTTCACA AACCGGAAAA
TCCGCAAGAG CAGTCAGAGA AGTTCTATCT GCCGAAACAT TAGAAGAGGC AGAACAAAGA
CAGCAGGACA TAGAAGATGA ATTTGATCCA GAAGAAGAAA TTATAAAATC TATGAAAAAA
CAAGGCAAGC AGGAAAATCT TAGCTTTTTT GCATTCACAG CAACCCCAAA GGCTAAAACA
TTAGAAACCT TTGGCCATAA AGACAAAGAA GGGAAACCTG TTCCCTTTCA TTTATATCCC
ATGAGACAAG CTATTGAAGA AGGGTTTATA TTGGACGTAT TGAAAAACTA TACCACTTAT
AAAACCTATT TTAAACTGGC TAAAAGAATT GAAGATGATC CAAACTTAGA TAAGAAAAAA
GCAGCAAAAG AAGTAGCTAG ATTTGTTAGC CTTCACCCGC ACAATCTAGC GCAAAAAACT
GAAGTGATGA TAGAACACTT CCGAAATGTA ACTATGCACA AAATAAATGG TAAAGCTAAG
GCAATGCTGG TGACAAGCTC TAGATTTCAT GCACTAAGAT ATAAATTTGA ATTTGATAGA
TATTTAAAAG AAAACGGGTA CGATGATATT AAAACCCTAG TTGCTTTTTC AGGAACAGTA
CAAGACCCTG AACTTGATAA AGAATATACA GAATCGGAAA TTAATCAGAT AAGAGAATCT
GAACTTCCAC AAAAATTTGA TACTGATGGA TACCGTCTTC TTTTAGTTGC AGACAAATAT
CAAACTGGAT TTGATCAGCC ATTACTTCAT ACAATGTACG TTGATAAAAA ACTGACTGAT
GTTAAAGCAG TCCAAACCCT GTCCAGGTTA AATCGCCCTT ATCCAGGTAA AGATGATACA
TTTGTCCTCG ATTTTGTCAA TGAAGCGGAT GATATTAAAA AAGCCTTTCA ACCTTTTTAT
GAGCAAACAA CCGTTGAAGA AACCACTGAT CCCAATCTGC TTTATGACTT GAAGTATAAG
CTGGATGATT TTCAGGTATA TTGGCAAACT GAGATAGATA ATTTCTGTAA AGTATTCTTT
AAACCACCAG AAAAGCAAAA TAAAGATAAA GATGCAGCTA TGTTAAATTC ATATGTAGAT
CCTGCGGTAG ATAGATTTAA AAATAAACCA AAAGAAGAGC AGGAGGAATT TCACAAGACA
CTTACAAGCT TTATCAGAAC TTATGCTTTT TTACTGCAAA TCATCCCCTT TCAAGACCAA
GAGCTTCATA AACTAGATGC TTATGGACGA TTTTTACTAA CTAAACTACC TAGTCAAAGA
AACCATGAAG ATACAGTAGA ATTAAATAAT GAAATTGATT TAGAATATTA CAGGTTAGAA
AAAACCGGTG ACCACAGTGT TGTATTGGAA GAACAAGGTG AATATGGAGT TAGGGGTACC
ACCCATGCAG GAACAGGACA AAATAAAGAC AAAGAAGATG AAAAAGCTCC TTTGTCAGAG
ATTATAGAAA TAATTAATGA ACGATTTGGA ACTGACTTCA CAGAAAATGA CTGGCTATTC
TTTGAACAAA TTAAAAATGA CATGTTAGAG GATGAGGAAT TAGAGAAGCA TGCACGGAAC
AATAGGAAAG ATAATTTTTA CTACGCTTTT AAAGACCACT TTGATAAAAA GACTATAAAG
AGAAGAACTC AGAATATGGA ACTGTTTGCC ATGTTGATGG ATAATGAAGA ATTCAAAGAA
AAGGTAATGG ACTTCTATAT GAATGAAGTA TTTAAGGAAT TTAAAAATAA AGCTAGTTCA
TAA
|
|---|
| Protein sequence | MSVDHSEISL EKTIESYLIN HGGYIKGDPS EFAREKALFP KTFIAFIKDT QPDKWEKLER
MHGDQVEEKV IYRLTRELSQ RGMLDVLRKG ITDFGVKLTT AYFPPASGLN PEIQELYDKN
RLTATRQVRY STKNENSLDL VLSINGLPVA TAELKNPSTG QTFQDAKKQY KEDRDPKEPI
FQFKKRTLVH FALDTDEVYM TTKLAKGNTV FLPFNKGKDG GKGNPENPNG YRTAYLWEEI
WEKDTWMKIV SRFMNLEVKK EEKDGKQITK ENIIFPRYHQ LEAVFNITND AQKRGPGKNY
LVQHSAGSGK SLTIGWLAHR LSNLHDDNNA PVFNSVIVIT DRVVLDKQLQ ETIYQIDHQQ
GVVERIDRHS SQLKDALEKG KKIIITTLQK FPVILDEIKG LPERNYAVIV DEAHSSQTGK
SARAVREVLS AETLEEAEQR QQDIEDEFDP EEEIIKSMKK QGKQENLSFF AFTATPKAKT
LETFGHKDKE GKPVPFHLYP MRQAIEEGFI LDVLKNYTTY KTYFKLAKRI EDDPNLDKKK
AAKEVARFVS LHPHNLAQKT EVMIEHFRNV TMHKINGKAK AMLVTSSRFH ALRYKFEFDR
YLKENGYDDI KTLVAFSGTV QDPELDKEYT ESEINQIRES ELPQKFDTDG YRLLLVADKY
QTGFDQPLLH TMYVDKKLTD VKAVQTLSRL NRPYPGKDDT FVLDFVNEAD DIKKAFQPFY
EQTTVEETTD PNLLYDLKYK LDDFQVYWQT EIDNFCKVFF KPPEKQNKDK DAAMLNSYVD
PAVDRFKNKP KEEQEEFHKT LTSFIRTYAF LLQIIPFQDQ ELHKLDAYGR FLLTKLPSQR
NHEDTVELNN EIDLEYYRLE KTGDHSVVLE EQGEYGVRGT THAGTGQNKD KEDEKAPLSE
IIEIINERFG TDFTENDWLF FEQIKNDMLE DEELEKHARN NRKDNFYYAF KDHFDKKTIK
RRTQNMELFA MLMDNEEFKE KVMDFYMNEV FKEFKNKASS
|
|---|
| |