| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0608 |
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| Symbol | |
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| ID | 6316768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | - |
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| Start bp | 633491 |
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| End bp | 634963 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 642642991 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_001916791 |
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| Protein GI | 188585246 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 65 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGC AAACAGTATT TATAGTTTCC CTGGCCATTA CATTAATAGT TCTGGGTTTG
GGTATTTTCA ATCAACCAGC CTTGGAATAC TATGTGGAAA CGGCCTACCA AGGCATTCTC
GAATATTTTG GCTGGGTTTA CATGTTAGCC ACCTTTTTCT TTTTGGTTTT TGCCATAGGC
CTTTCATTTA GTAGGTTTGG GCAGATCAAA CTAGGAGCTG ATCATGAAAA ACCTCAGTAT
AGTTACTTTG GCTGGTTTAG TATGCTATTT GCAGCTGGAA TGGGAATTGG GTTAATTTTT
TGGGGTGTAA GTGAACCTCT GGTTCATTAT CTTGAACCCC CGGCCCATAT TCCAGAAGCT
TCTGGGGATG CTGCTGGCTT TGCCATGAGG TACAGTTTTT TCCACTGGGG ATTACAGCCA
TGGGCTATCT ACATTATTAT GAGCCTGTCA ATTGCCTATT TTTCCTTTAG GAGAGGGATG
CCTCCCCTAA TCAGTTCGTG CTTCTATCCC ATGTTGGGAG AAAACATATA CAAATTCCCG
GGATACTTGA TTGACATTTT AGCCGTAGTT GCAACTATAT TTGGTGTGGC CACCTCCTTG
GGATTGGGAG CTACACAAAT TCATAGTGGT TTAAGCTTTC TCTACGGATT ACCCGATGGT
TTTAACATTA CTTTAATAAT CGTAATAATA GCTACAATTT TATATATGAT TTCCAGTGTA
GTAGGATTGG ACAAGGGTAT TCAAGCATTA AGTAAATTAA ATATGTTTAT TGCCTTAATT
TTGATGGTAT TCATGTTAAT AATGGGTCCC ACCTCTTATA TCTTTAACAT ATTTACAAGT
ACCATCGGAA CATATACTAA CCGTTTACTT GAGATGAGCC TTGATACTAA CCCTTTTACT
GGACATGAAT GGATAGAATC CTGGACTCTT TTCTATTGGG CCTGGTGGAT TTCCTGGTCA
CCTTTTGTCG GTTTATTTGT AGCGAGAATT TCCAGAGGTA GGACTATTAA GGAATTTATC
CACGGAGTGT TGCTGGTACC AACCCTGATG ACATTTTTAT GGTTCAGCGT ATTCGGTGGA
GCCGGTTTTC AACTACAATT GACCGAAGGT ATCCATATAG CGGAAATTGC TCAACAGGAC
GCTTCCCTGG CATTATTCCA CTTATTTGAA GCTTTCCCAT TGGGAAGTAT TTTATCGTCA
GTCACTATCC TGTTACTATT TGTGTTTTTC ATTACTAGTG CAGACTCGGC AACCTTCGTC
CTTGGTATTT TAAGCTCAAA TGGTACTCTC AATCCATCAC TAGCTAAAAA GATGACCTGG
GGAGCTAGCC AGTCAGGGAT AGCTCTTATC CTGTTATTCA CAGGTGGAAT TCAAGCTCTA
CAACAAATGT CAATAACAGC AGCTCTACCT TTTTCAATTA TTATGGTCTT GTTATGCTAT
AACCTATTGT CAGCCTTGAA AGAAGAAGTT TAG
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| Protein sequence | MKMQTVFIVS LAITLIVLGL GIFNQPALEY YVETAYQGIL EYFGWVYMLA TFFFLVFAIG
LSFSRFGQIK LGADHEKPQY SYFGWFSMLF AAGMGIGLIF WGVSEPLVHY LEPPAHIPEA
SGDAAGFAMR YSFFHWGLQP WAIYIIMSLS IAYFSFRRGM PPLISSCFYP MLGENIYKFP
GYLIDILAVV ATIFGVATSL GLGATQIHSG LSFLYGLPDG FNITLIIVII ATILYMISSV
VGLDKGIQAL SKLNMFIALI LMVFMLIMGP TSYIFNIFTS TIGTYTNRLL EMSLDTNPFT
GHEWIESWTL FYWAWWISWS PFVGLFVARI SRGRTIKEFI HGVLLVPTLM TFLWFSVFGG
AGFQLQLTEG IHIAEIAQQD ASLALFHLFE AFPLGSILSS VTILLLFVFF ITSADSATFV
LGILSSNGTL NPSLAKKMTW GASQSGIALI LLFTGGIQAL QQMSITAALP FSIIMVLLCY
NLLSALKEEV
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