Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nther_0557 |
Symbol | |
ID | 6314667 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
Kingdom | Bacteria |
Replicon accession | NC_010718 |
Strand | - |
Start bp | 580017 |
End bp | 583544 |
Gene Length | 3528 bp |
Protein Length | 1175 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642642941 |
Product | putative bifunctional 4-alpha-glucanotransferase/glycogen debranching enzyme |
Protein accession | YP_001916741 |
Protein GI | 188585196 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0366] Glycosidases [COG1640] 4-alpha-glucanotransferase |
TIGRFAM ID | [TIGR00217] 4-alpha-glucanotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.641532 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAAACAC CTATTAAGCT GTTTCATGAC TCCCATAATC CTTTGTATCG AAAACCATTT GGAGCAGTCT CTATTAACAA AGAGATCTTA TTAAGGCTTT ATATTCGTAC TACTAACCCA AAGGAACTGC AAGTCTTGGC TAATTGCATT GACGATCAAG GTAACAAAGT GGCGTATCCC ATGTATCAAA CTGGAATTTC GGAAAATGAC TGCGATCAAA TTGACTACGA TAATGGCAAT GGTAGTATTT ATAAAGAAGA ACTTACAGGG TATTTTTATG AAGCATCCAT CAAATCACCT GATACACCAG GATTATTTTG GTATACTTTT ACAGTCGTAA GTAATGAAAC TAAAGTTTAT TTCGGTAACA ATCAGGAATT ATCAGGAGGC CCAGGCCAAG AAAGTCACCA AGAACCTTTA GGTTATCAAG TAACTGTTCA CGAGCAAGAT TTACAAATAC CCAATTGGCT AAAAGATGCT GTCATTTATC AAATATTTAT TGATAGATTT AATAATGGAA ATGAAGATGG TACGGTATCT AATCCTAAGA GAAATAGTTT TTTACATTCC CACTGGGATA ATTCGCCTCT GTATGTTCGA GACCAAGAGG GAAAAATTTT GCGATGGGAT TTTTTTGGAG GAAATTTAGA GGGAGTCAGG CAAAAACTGG TTTATCTCAA AAAATTAGGT GTTTCCATTA TCTATTTTAA TCCTATTTTC GAAGCGGAAA GCAATCATAG ATATGATGTA GGTGACTATC ACAAAATTGA TGCGATGATA GGAAACAATG AGGAATTTCG TCAATTTTGC AAAGAAGCTG AAAACATGAA CATTAAGGTT ATCTTAGACG GTGTCTTTAG TCACACGGGA AGTAATAGCC TTTATTTTAA CAAATATGGA AGCTATCCAT CATTAGGGGC ATATCAATCT AAAGAATCTC CTTATTATAA TTGGTACCGC TTTTTAGAAC ATCCTCACAA ATACGAAAGT TGGTGGGGAA TTGACAATCT CCCAAATGTA GAAGAACATA ATCCTGATTA TCAAAACTTT ATTATTAGTG ATGACAACAG TGTTTTAAAG CACTGGTTCC GGCACGGTGC AAAGGGATGG AGATTAGATG TAATTGATGA AATCCCTGAT GAGTTTTTAC AAAATTTCTA TCAGACTTTA AAATCTCAAG ATCCAGAAAG TATTGTTATT GGAGAAGTGT GGGAAGATGC CTCCAATAAA ATTAGTTACG ACAGGCGGAG GCAATATTTA TTGGGAAAAG AGTTGGATTC AGTCACAAAT TATCCTTTAA GAAACATAAT GCTGGATTTT GTATTAGATC ATAACAGCTC TCAAGAGACT GCTCGAAGAG TTTTGTCCCT CATGGAAAAT TACCCTGAAG ATTATTTTTA CACAGCCATG AATTTACTCG GAAGTCATGA TGTCGAAAGG GTTTTGACTG TCTTAAAAGA CAATACTCCT GATGATTTAA GAGAAGATTT GGACAGTATA GCTAAAAAAC GTCTCAAGTT GTTGACTCTC TGGCAGATGA CTTTCCCTGG GATACCTTCA ATTTATTACG GAGACGAAGC AGGATTAGAG GGCTATCAAG ACCCTGACAA TCGAAAGACT TATCCCTGGG GCAATGAGGA TCAGGAATTG GTTTCATGGT TTAGAAAATT AACAGCTATA AGAAACCACT ACGATGTATT ACGAACTGGC GATTTTTCCC TGGTCACTAC AGTCAGTGAT TCTCAACAAG ATCTGGATAA GGACATTTTA CTGTATCGAC GTAAAATTTC TCAGAACCAA GATAGATTCC ACCAAAAAAG ATTAAACAAT ACAGCTGTAA TTGTTCTAAA TAGAAATCCC AGAGAACGAA AGAATCTAAA AATTCATATC TCAGAAGTTA CTGGCACGAA TAGTGGTCAA AGCTTTGTAG ATCCCTTAGA GGATTATAAC ATTGTTTCGA CTGACAATGA TGGATATCTT GAGATCACCT TAGAACCTTT AGAATGCAAG TTACTATTAG CCGATAGATA TCAAGGAAAC GCAAATTTTG AAAGGAACGC TGGTATTTTA CTTCACCCTA CTTCATTACC TTCTCCTTAT GGAATTGGTG ATTTGGGTAA AGAAGCCTAC AGATTTGTTG ATTTTCTAAG GGACTCTGGT CAAAAATTTT GGCAGATTCT CCCTCTGAAC CCTCCAGGTT ACGGAAATTC TCCCTATCAG TGCTTTTCTG CTTTTGCCGG AAATCCTTTG TTAATAAGCT TAGATAAGCT GACTGAACAA GGGCTGCTTA CTCAGAATAG ACTTAGTGAA GCTCAACAGA AACAGACTAA CTATGTCGAC TATGAAAAGA CTTATCAATT GAAAGAACCT TTATTACAAG CTGCCTTCGA AAATTTCATT GATAATGGTG GGAAAGAATC CCATGATTTT AGAGAGTTTA TCTCTCAGCA CAGTTACTGG TTAGAAGATT ACGCTATGTT TATGGCATTA AAAGCTCACT TCAATTATAA ACCTTGGCAT CAGTGGGACG ATGAAGAAAT TATCTGGAGA AAACCACATG CACTAGCAAA ATACAGAGAA AAATTAGCTA ATACTATTGA TTATCACAAA TTTTTGCAGT ATATATTTTT CAATCAATGG CATTCATTAA AAAACTATAC CAACAAACAA AATATACATA TTATTGGTGA CCTTCCCATT TTCGTGGCTC ATGATAGCAG TGATGTTTGG GCACTAAAAC ATTACTTTGA GTTGGATTCC CAAGGTAAAC CGGCAAAAAA GGCTGGAGTA CCACCAGATT ACTTTAGTGA AAATGGACAA TTGTGGGGCA ATCCTCATTA CGACTGGAAC GAACTAGAAC AAGATAATTA CAGGTGGTGG ATTGAACGAA TTAAAGTCCT AATGCAGTTA TCCGATGTAG TACGCATTGA CCATTTTAGA GGTTTTGAAG CTTATTGGGA AATACCTGGT TCAGAAGACA CGGCAGTAAA TGGCACATGG GTGAAAGGAC CCGGAGAAAA GTTTTTTAAT ACCATAGAAA GTAATCTCCA GGATAAGTAT GACCCGCAAA TAATTGCCGA GGATCTAGGA GTAATTACCT CAGAAGTAGA GGAACTTAAA TTAAAATTTG ATTATCCTGG TATGAGTATT TTACAATTTG CAATCCATAA CGAGCCAGAT CACAAATTCA GAGTCCCCTT GTACAACAAA AATACTGTAG CCTACACTGG AACTCACGAC AATGACACTA TAGTAGGTTG GCTTGAAAAT GAATTGGGTG AGAGATTTTC TTCCCAACAA GAACAAATCA ATGCCGCCTG GAAACACATC GAAATGGTAT ATGAAAGTGA TGCCCGCTCA GCAATTATTC CTTTACAAGA TTTTTTAGGA TTAAATAGTA ATCACAGAAT GAATACTCCA GGAACCATTG GTGATAATTG GGAATGGCGT TTTTGCTGGG ATCAAATTGG GCAAGAGCTT TCTGATAAAA TTAATAATTT GGTTTATAAA ACTAAAAGAA AACCGTAA
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Protein sequence | METPIKLFHD SHNPLYRKPF GAVSINKEIL LRLYIRTTNP KELQVLANCI DDQGNKVAYP MYQTGISEND CDQIDYDNGN GSIYKEELTG YFYEASIKSP DTPGLFWYTF TVVSNETKVY FGNNQELSGG PGQESHQEPL GYQVTVHEQD LQIPNWLKDA VIYQIFIDRF NNGNEDGTVS NPKRNSFLHS HWDNSPLYVR DQEGKILRWD FFGGNLEGVR QKLVYLKKLG VSIIYFNPIF EAESNHRYDV GDYHKIDAMI GNNEEFRQFC KEAENMNIKV ILDGVFSHTG SNSLYFNKYG SYPSLGAYQS KESPYYNWYR FLEHPHKYES WWGIDNLPNV EEHNPDYQNF IISDDNSVLK HWFRHGAKGW RLDVIDEIPD EFLQNFYQTL KSQDPESIVI GEVWEDASNK ISYDRRRQYL LGKELDSVTN YPLRNIMLDF VLDHNSSQET ARRVLSLMEN YPEDYFYTAM NLLGSHDVER VLTVLKDNTP DDLREDLDSI AKKRLKLLTL WQMTFPGIPS IYYGDEAGLE GYQDPDNRKT YPWGNEDQEL VSWFRKLTAI RNHYDVLRTG DFSLVTTVSD SQQDLDKDIL LYRRKISQNQ DRFHQKRLNN TAVIVLNRNP RERKNLKIHI SEVTGTNSGQ SFVDPLEDYN IVSTDNDGYL EITLEPLECK LLLADRYQGN ANFERNAGIL LHPTSLPSPY GIGDLGKEAY RFVDFLRDSG QKFWQILPLN PPGYGNSPYQ CFSAFAGNPL LISLDKLTEQ GLLTQNRLSE AQQKQTNYVD YEKTYQLKEP LLQAAFENFI DNGGKESHDF REFISQHSYW LEDYAMFMAL KAHFNYKPWH QWDDEEIIWR KPHALAKYRE KLANTIDYHK FLQYIFFNQW HSLKNYTNKQ NIHIIGDLPI FVAHDSSDVW ALKHYFELDS QGKPAKKAGV PPDYFSENGQ LWGNPHYDWN ELEQDNYRWW IERIKVLMQL SDVVRIDHFR GFEAYWEIPG SEDTAVNGTW VKGPGEKFFN TIESNLQDKY DPQIIAEDLG VITSEVEELK LKFDYPGMSI LQFAIHNEPD HKFRVPLYNK NTVAYTGTHD NDTIVGWLEN ELGERFSSQQ EQINAAWKHI EMVYESDARS AIIPLQDFLG LNSNHRMNTP GTIGDNWEWR FCWDQIGQEL SDKINNLVYK TKRKP
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