Gene Nther_0518 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0518 
Symbol 
ID6315227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp540479 
End bp542356 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content41% 
IMG OID642642902 
Productpenicillin-binding protein 2 
Protein accessionYP_001916702 
Protein GI188585157 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0768] Cell division protein FtsI/penicillin-binding protein 2 
TIGRFAM ID[TIGR03423] penicillin-binding protein 2 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000002903 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTAATGT CTGAAGAGAA AGATAAAGTT ATTTTTAAAA GAATACAGGC TTTTTTTGTA 
ATTACAATTT TTTTGTGTTT CATACTGGTA GCGCGCCTTG CCTATCTACA GGTATTAGAA
GGGGATTATT ACGAACAAGT TTCAGAAGAA AACCGCATGC GTAGGATAAC TATTGACCCA
CCGAGAGGAG AAATTTATGG TCGGGATGGC GAATTGTTGG CTAAAAACAC CCCTGGGTAT
ACGGTATCTC TTATGGATGT AGGTGGAGCT GACGAAGAAA AGGTGGTCTA TTTTTTAAGT
GATTACCTGG AAATTGAAGA ACAAGAAATA AAGGATAAGA TTGATTCGCA ACGATTTCGT
CAATTTGAAC CTATACGAAT AAAATCAGGA TTGAGTTATG AACAGGTAGC ACACTTGGCA
GAAAAAAGGA CGGAATTACC AGGAGTTATT CTCGAAATAC AGCCAGATAG AATCTATACA
CAGGACAAAT TATTAGGTCA TGTGTTAGGT TATACCGGTG AAATCACCAG GACACAGTTA
GATAGAGGCA TGGGGGAAGA AGGTTATAGG CCAGGTGATA TTGTAGGCCA ATCGGGGCTA
GAAAAAACAT ACCAAGAAGA GCTGCGGGGA GAACCTGGAT TTCGCCAGGT AGAAGTTAAT
AGATTCGGTC GAGTGATCAA TAATATGGGT GAAGAAGAAC CAATTCCAGG TAATAACCTG
CACCTAACCA TCGATGTTGA ACTTCAAGAA TTTGTGTCGG AATCCTTGGA CCATGCCATT
GAAACCATCC GCGAAGAAGA AGGGGAAGAA TATGAAGATC ACCTAGGAGG GGCCTCTGCT
GTTGTTATGA ATCCTGATAA TGGTGAAATA CTTTCGATGG TCAGCTTACC TAAGTATGAT
CCCAATACAT TATACGAGAA TTATGCTGAT TTGATAGAAG ATAGCACACG GCCACTCAGA
AATAGAGCTA TTTCTGAAAC CTATCCACCA GGCTCAACCT ACAAGATGGT AACAGCCTTA
GCTGCCCTTG AAGAAAATGA GCTGGCAGCC GAAGAAACAA TTTTAGATGA AGGTAGATAC
TGGAATCCGC CAAGACCGAG GAACTTTCAA AATCGTGCCC TTGGTAGAAT AGACGTAGTT
GATGCCTTGA AATATTCTTC TAACGTGTTC TTTTCTGAAA TGGGACATCG CTTAGGTATC
AATCTACTAT CCGAATGGAG TAGGAATTTT GGATTTGGTG CGACTACTGG TCTTGAGGAT
TTAGATGGTG AACATACCGG GATAGTAGCC GGGGTAGAAT ATAAAGAGCG ACATTTTCAA
GAAGCAGAAC AGCAGGTTTG GTATCCGGGA GAAACCATCA TAGCTGCTAT GGGCCAGGGT
TATCATACTT ATACTCCTTT ACAATTAGCT AATTATGCTG CTATGTTAGC AAATGAAGGA
ATCCACTACC GGCCTCATCT AGTTAGTGAA GTGACTGACT CTCAAGGTGA AATTGTAGAA
AAAACCGGCA CTGAAACTCT TAATGAGTTG GATATCTCTC AAGGAAATTG GGATTTGGTA
AAAGAAGGGA TGCGACAAGT GGCCCAACCT GGAGGCACTG CTGGCTGGAT GTTTGATGAT
CTAGAATTTG ATGTCGGATT AAAGACAGGG ACAGCGGAAG TGGCAGGAAG GCCGTCTCAT
GGTTGGATAG TAGGATTTGC TCCTTATGAA GATCCGGAAA TAGCTTTTAG TATTTTTATT
GAACACGGTG GCGGTTCAAG TAGAGTTACT CCTGTTGCAA GGGCTTTAAT TGATTACTAT
TTTGACTTAA TGGAGGAAGA TGAAGAAGAA CCTGAAGAAT TAGATATGGA TACTGACTCA
GGCTATGTTG ATGAATAA
 
Protein sequence
MLMSEEKDKV IFKRIQAFFV ITIFLCFILV ARLAYLQVLE GDYYEQVSEE NRMRRITIDP 
PRGEIYGRDG ELLAKNTPGY TVSLMDVGGA DEEKVVYFLS DYLEIEEQEI KDKIDSQRFR
QFEPIRIKSG LSYEQVAHLA EKRTELPGVI LEIQPDRIYT QDKLLGHVLG YTGEITRTQL
DRGMGEEGYR PGDIVGQSGL EKTYQEELRG EPGFRQVEVN RFGRVINNMG EEEPIPGNNL
HLTIDVELQE FVSESLDHAI ETIREEEGEE YEDHLGGASA VVMNPDNGEI LSMVSLPKYD
PNTLYENYAD LIEDSTRPLR NRAISETYPP GSTYKMVTAL AALEENELAA EETILDEGRY
WNPPRPRNFQ NRALGRIDVV DALKYSSNVF FSEMGHRLGI NLLSEWSRNF GFGATTGLED
LDGEHTGIVA GVEYKERHFQ EAEQQVWYPG ETIIAAMGQG YHTYTPLQLA NYAAMLANEG
IHYRPHLVSE VTDSQGEIVE KTGTETLNEL DISQGNWDLV KEGMRQVAQP GGTAGWMFDD
LEFDVGLKTG TAEVAGRPSH GWIVGFAPYE DPEIAFSIFI EHGGGSSRVT PVARALIDYY
FDLMEEDEEE PEELDMDTDS GYVDE