Gene Nther_0439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0439 
Symbol 
ID6315576 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp460880 
End bp462157 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content36% 
IMG OID642642823 
Productprotein of unknown function DUF58 
Protein accessionYP_001916623 
Protein GI188585078 
COG category[R] General function prediction only 
COG ID[COG1721] Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones81 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAAGAAT TTAAGGTAAG ATTTATAAAA AAACAAGTGT TTTTTATTCC TGTACCAGTG 
TTGATTTTAG CATTTATATC TGGTGTATCG GTTTATTGGA TTTTATTTTG GTTTATAGTA
TTATGGTTGG GGGGTTCCCT AGCTTGGCTC TTATATACTG CTTGGAATTT GGAACTAGAT
ATAGAATTGA AGGATCAGGT CATGATCAGG AAAGAGTCTA CCAGTATTAA AATAAGGCTC
TTTAACGAAT CTTTTCTACC TTTTCCCTAT GGTGAATTAT TAACAAATAA CTGGAGTTAT
CGTGATATGT CGGGCGCAAA CCAAAAGCTA TTTGATCAAG ATCAGAAACA AGATGATAAT
CATACCAGAA TATTTCAATT TTTCTTCAAT GATAGGCAAG TTGATAGTTG GGTTGAAGTT
ACTGATATTA ATCCACTAGG GGGGTGGCAA CGTGTATTTG ATGTGAAGTG TTATACTAGA
GGAAAGTTTT ATATAGGACC TATGAAAATT AGAATTTTTT CTCCTTTTAG TGTCTTTTTG
GTGGAGAAAA AGTTTGATGA AAAAGAATTA GTTACCGTAC AACCCCGCTT GTTGTCTTTT
ATAGGTCAAT TCGATGCTAG CGGTAGTGAT CCCCAGGGAA TTACTAGGAA AAAAAATACT
TTTTTTCAGC CCATGGATTA CATGGAAGTC CATGACTTAC GACCCTTTGT ATCAGGAGAT
CCACTCAAAT TAATTAACTG GAAAGTTTCG GCCCGGCAAG GGGAGTTGTA TGTAAAAAGG
ATTGAAAATA CTGGTGATGA GCGGTTATTA TTATGCGTTG AATTTTCAAA AAAGTATTAC
TATTCGCGGG AACAACAGGA TCTGTTATTG GAAAAAGCCT TATCAGTAGT GAAATATTTT
TCTGATAACA ACATTCAACT GGGGATTCTA ACTATTGATG ATAATTTAAG ATATTTACCG
CCCTCTTCAG GCAGAAATCA GTGGCAATTG GCCCGAAAAT TGTTTACCGA TTTAAAAAGA
AATACCAGCG AAAACCTGCC TAGCTACTTC CAGAGGACTT CTCAAACTAT GAAAGGTAAC
AAGATCTTGT GGTTGACCCC TTATTTAGAT AGGCATTATA AGCAGGGATT AAAAACACTG
GCTTCCGGTG GGACACAGAT AACTTTGCTA ATAGACCAGA AAGGCAAAAA TATTGATATA
AAAGATTTAA CAATTCCTGC TTATCAATTG AACTATTACA GGGGTCAAGT TGCAATTAAG
GAGGTGTTCA CCTCTTGA
 
Protein sequence
MEEFKVRFIK KQVFFIPVPV LILAFISGVS VYWILFWFIV LWLGGSLAWL LYTAWNLELD 
IELKDQVMIR KESTSIKIRL FNESFLPFPY GELLTNNWSY RDMSGANQKL FDQDQKQDDN
HTRIFQFFFN DRQVDSWVEV TDINPLGGWQ RVFDVKCYTR GKFYIGPMKI RIFSPFSVFL
VEKKFDEKEL VTVQPRLLSF IGQFDASGSD PQGITRKKNT FFQPMDYMEV HDLRPFVSGD
PLKLINWKVS ARQGELYVKR IENTGDERLL LCVEFSKKYY YSREQQDLLL EKALSVVKYF
SDNNIQLGIL TIDDNLRYLP PSSGRNQWQL ARKLFTDLKR NTSENLPSYF QRTSQTMKGN
KILWLTPYLD RHYKQGLKTL ASGGTQITLL IDQKGKNIDI KDLTIPAYQL NYYRGQVAIK
EVFTS