Gene Nther_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0426 
Symbol 
ID6317120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp445320 
End bp446939 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content38% 
IMG OID642642810 
ProductAmidohydrolase 3 
Protein accessionYP_001916610 
Protein GI188585065 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones69 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGAAA TCCTTTTAAA GAATTGTCGT GTGTATACCA TGGACGAATC TGTACCTTAT 
GCAGAGCAAA TATTGTTAAA AAACGGAAAA ATAGCTCAAC TAGGTACTAG AGATGATAAT
TTAGCTTCCA ATAATAGTGT CCAGGAAATG GACTTAGGTG GTCAGACGGT TTTACCTGGT
TTGAATGATA GTCACTTACA TCTTCTTAGT TATGGGATGG CTCTTTCAAC TGTAGATTTA
AGTGATGTCA GTTCATTCAG AGAATTAATT GCTAAAGTTC AAAATTATAT AGACAATAAC
AATATTCCAA AACATGAATG GGTAATCGGA CAGGGATTTG ATGAAGAAAA TTTACAAGAA
AAAGATTTCC CTACTCGAGA GATATTGGAT CAAATTTCAC AATGTCATCC AGTGATAGTG
AAGCGAAAGT GTACTCATGT AAGTGGAGTA AATAGCTATG CGTTGGATTT AGCAGGGATC
ACCGCTGAAG ATAACGAGAA AATTGAGGGT GGGAAAGTTT ATTTAGACCA AGATGGGAAA
CCTAATGGAG TTTTGGCAGA AAATGCCCAA AACTTGTTAT CACATATCCT ACCTTCTTAT
TCGGAAAAAG ACCTGGAGAA ATATATCAAG TTGGCTGGGG AAGCTTTTAT TGATAAGGGT
TTGACTTCTG TCCAATCTGA TGATTTAAAG GCGATTCCAG GTGGCGAAGA TATGATTATG
AATGCTTACC TTTCCCTGGC GGAAAAAGGA GAACTCCCCG TAAAGGTGAA TTTACAACTT
CAATTATCTT CTGAAGAAGA AATAACTACT TTTATACAAA AGTATAGTCC TTATTTCCAA
AGTTCAGTTA CAGATTATTT AAATTTTGGT CCTTTAAAAG TTTTATTAGA TGGTTCTCTT
GGAGGAAAGA CTGCAGCACT TAGACAACCC TATTTAGGCG ATCAAGAAAA TTTCGGTATT
GTAACCTATA CTCCGGAAAG TCTTGATTCC CTCTTGGATT GTGCAGCACG TCATCATTTA
CAAATTGCAT GTCATGGTAT TGGTGATTAC GCTATTGAGC TATTTTTAGA CTCCATTGAT
AAAATCCAGG CTAAATTTGG TGGAGATTAT CGTCATCGAA TAATTCATTG TCAATTGACA
GATTTGGATC TGATTAATCG AATTGCTCGT CAAAACATTT CAGTAGATGC TCAACCTGAT
TTTGTTGGAA GTGATTATGG ACTATTAGAA GAGCGCCTAG GCTTTGCTCG CAGTATTAAC
ACCTATGCCT GGAAAACTAT GTTGGATAAG GGGATCAATG TATCTGGGAG TTCAGACTGT
CCTGTTGAAC CTTTTGACCC GAGACTAGGA ATTAAGGCAG CAGTTACCAG ACAAGACGCT
AATAATAATC CCTGTGGAGG ATGGCATCCC TGGGAAAAAG TGTCAGTTTT TGAAGCCCTT
AAGATGTATA CTGTAAATTC TGCTTATGCC ACCTTTGAGG AACAGGTCAA AGGAAAGCTA
GCACCTGGTT ATTGTGCAGA TATGGTGGTC CTGGAGGAGG ATCCTTATAG CACTCCTCCC
CAAGAACTTG ATTCCCTTTC TGTAAATAAA GTCTTTATTA ACGGCAAAAT AGTCAAGTAA
 
Protein sequence
MSEILLKNCR VYTMDESVPY AEQILLKNGK IAQLGTRDDN LASNNSVQEM DLGGQTVLPG 
LNDSHLHLLS YGMALSTVDL SDVSSFRELI AKVQNYIDNN NIPKHEWVIG QGFDEENLQE
KDFPTREILD QISQCHPVIV KRKCTHVSGV NSYALDLAGI TAEDNEKIEG GKVYLDQDGK
PNGVLAENAQ NLLSHILPSY SEKDLEKYIK LAGEAFIDKG LTSVQSDDLK AIPGGEDMIM
NAYLSLAEKG ELPVKVNLQL QLSSEEEITT FIQKYSPYFQ SSVTDYLNFG PLKVLLDGSL
GGKTAALRQP YLGDQENFGI VTYTPESLDS LLDCAARHHL QIACHGIGDY AIELFLDSID
KIQAKFGGDY RHRIIHCQLT DLDLINRIAR QNISVDAQPD FVGSDYGLLE ERLGFARSIN
TYAWKTMLDK GINVSGSSDC PVEPFDPRLG IKAAVTRQDA NNNPCGGWHP WEKVSVFEAL
KMYTVNSAYA TFEEQVKGKL APGYCADMVV LEEDPYSTPP QELDSLSVNK VFINGKIVK