Gene Nther_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0394 
Symbol 
ID6316227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp409837 
End bp411462 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content30% 
IMG OID642642778 
ProductRecombinase 
Protein accessionYP_001916578 
Protein GI188585033 
COG category[L] Replication, recombination and repair 
COG ID[COG1961] Site-specific recombinases, DNA invertase Pin homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value0.018734 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTTACTA CAATAAAATA TGCAAAATAT ATGCGTTACT CAAGGGTAGA TGGTGATAGA 
GAGAAAGAAA GTATTCAAAA TCAGGATAAA ATAATTGAAA ACTATATCAA AGATCGTGAA
ACTAAATATA ATGAGAAATG GTTGTTAGTA GGAGAATATG TGGACCTAGA TTATACTGGC
TCAAACTTTA ATAGACCTGA ATTTTTAAAA ATGAAGGAAG AAGTTGAAAA TGATAAAATT
GATGTAATAA TATCGAAAGA TGCGTCCAGG TTTGGAAGAA ACGTGGCAAC AGAGGTTTAT
TTTGAAGAAA TATTTCCAAA ATACAGGACA CGATTTATTG GAGTGGTTGA TAATGTAGAT
ACTGCTTCTG AAAACCAGGC TTTTGAAAGA AAGATAAGAG GATTAATGAA TGAGAACTAT
TGTAGTGATA TTTCACAAAA GGTTAAAAGC TCGCTAAAAA CTAAAATGAT TGAGGGTAAA
TTTATAGGGG CTTCTCCACC TTATGGATTT GAACGAGACC TTGATGATAA GCATAAGTTA
ATTGTTGATG AAGAGGTCAG ACCTATAATA TTGAAAATAG TGGATTTATA TTTAAAAGGT
TATGGGTTTT CAGCTATAGC TAAAATATTA AATGCTGAAA AAATACCATC ACCTTCTGCT
TATAAAAAAA TGAAAAAATC AAACTATAAA AATCCAAGAG CTAATAGGAG GTTGTGGAGT
CCTTCAACTA TTAGGAAAAT TTTAACAGAA CCTATTTATA ATGGCACACT CGTACAGGGA
AAGCATCCAA AAATTAACTA TAAAATTAAT AGTAGAAAAA AAAGTGGAGA GTCTGAGTTA
ATCAAAGTAG ATAATGCAGT TGAGAAAATT ATTGACGATG AAACATTTGA GTTAGTTGGG
AAAAAAATTA ATAGTAGAAG TAAAAATGTT AAGAATAATG ACTCTCCGAG TGTTTTACCA
GATAATGTGT ATTCAGGACT TGTATATTGT GAGGATTGTG GCTCAAAGAT GGTATATAGA
AGTGATAGGG ATATGTATAT GTGCGGTACC TATGCTAAAT ATGGGAAGAA ATACTGCTCC
AATCATAATA TCAAAACAAA AGTTATAAAT GAAGTGGTCA TAGAGCAATT AAATTTGATT
ATTAAGCTTA CAATTGATAT TAGAACTCTT TTGAACGATA TAAAAAAGAA ATACCAAGAA
GTAAGTGGTA AGGATGTTAT TGAAATTAAA AGAAAAAAGC GTGAAAATCG CCTAAAAACT
TTAAAAGAAT CTTTAAAAAT TTTAAGGGAA GAGTATGCAG ATGGTATAAT TGACCAAGAG
GAATATAAAG AGACTAGGTC TGAATATGTA AATGAAATTA ATACCATAGA AAATGAACTG
GGGAAATTAC AAGTTTCATC AAGCAAAGAA TCTGTAATTA ATGATTGGGA GGAGAAAGTT
AAGGACTTAG AAAAGTTTTA TAATAACTTT CTGAAAATTA ACAAAATAGA TAGAGAAATA
GCTTTAAAAC TTATAGATAC CATAACTGTA GGAACCGACC AAATATCTGA AATCAAATTC
GCTGGAGCTT CGCCATTTGA ATTAGCTCAA GAATTGAAAT CTGAAATATC AAGTGTGGCA
CTATGA
 
Protein sequence
MVTTIKYAKY MRYSRVDGDR EKESIQNQDK IIENYIKDRE TKYNEKWLLV GEYVDLDYTG 
SNFNRPEFLK MKEEVENDKI DVIISKDASR FGRNVATEVY FEEIFPKYRT RFIGVVDNVD
TASENQAFER KIRGLMNENY CSDISQKVKS SLKTKMIEGK FIGASPPYGF ERDLDDKHKL
IVDEEVRPII LKIVDLYLKG YGFSAIAKIL NAEKIPSPSA YKKMKKSNYK NPRANRRLWS
PSTIRKILTE PIYNGTLVQG KHPKINYKIN SRKKSGESEL IKVDNAVEKI IDDETFELVG
KKINSRSKNV KNNDSPSVLP DNVYSGLVYC EDCGSKMVYR SDRDMYMCGT YAKYGKKYCS
NHNIKTKVIN EVVIEQLNLI IKLTIDIRTL LNDIKKKYQE VSGKDVIEIK RKKRENRLKT
LKESLKILRE EYADGIIDQE EYKETRSEYV NEINTIENEL GKLQVSSSKE SVINDWEEKV
KDLEKFYNNF LKINKIDREI ALKLIDTITV GTDQISEIKF AGASPFELAQ ELKSEISSVA
L