Gene Nther_0322 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0322 
Symbol 
ID6316155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp337661 
End bp338332 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content31% 
IMG OID642642707 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001916507 
Protein GI188584962 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.541277 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGACAG AAAAATTTAC CAATATAGAA CCGGAAAAAC AAGACCGAGT TATAACTGCT 
GCTTTAAAAG AGTTTTCAGA ACATGGGTAT GAAAAAGCTT CTACAAATCG AATAGTTAAG
CAAGCGGGGA TTGGCAAAGG TATGCTGTTC TACTATTTCA AGAATAAAAA GGAACTTTAT
TACTATTTAA TTGATTATTC CATAGACTAT GTGACTAATG AGTACCTCGG CCATATTAAT
GAAAATGTAG TTGATTTTAT AGAAAGATAT AGACAGATCG CACAAATAAA AATGAAAAAA
TATGCTGAAA ATCCTCACGT TTTTAATTTT TTGGGTTCAA TTTATATAAA TAAAGATGTT
AAATTACCAC AGGAACTACA AAAGCGCTTT ATTGATGCAA GAGAATATGG TTATAGAGTA
CTATTTAGAA ATGTAGACAC TTCTTTATTT CGCCAAGATA TTGATTCGGA TAAAATCCTA
AAACTTATTT ACTGGACTCT TGAGGGTTAT GAACAAGAGA TACTCAAGAA GTTGGAGGGC
CAGAAATTAT CACAAATTGA TTATGAACCT TATTGGGATG AATTGGATCA GTATTTAGAT
ATATTGAAAA AAGTTTATTA TAGACAAGAG GGGGGTAAAA ATGACCATTT TGATAGCAGA
CAATATTACT AA
 
Protein sequence
MVTEKFTNIE PEKQDRVITA ALKEFSEHGY EKASTNRIVK QAGIGKGMLF YYFKNKKELY 
YYLIDYSIDY VTNEYLGHIN ENVVDFIERY RQIAQIKMKK YAENPHVFNF LGSIYINKDV
KLPQELQKRF IDAREYGYRV LFRNVDTSLF RQDIDSDKIL KLIYWTLEGY EQEILKKLEG
QKLSQIDYEP YWDELDQYLD ILKKVYYRQE GGKNDHFDSR QYY