| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0233 |
|---|
| Symbol | |
|---|
| ID | 6315991 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 241113 |
|---|
| End bp | 241916 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 642642616 |
|---|
| Product | N-acetylmuramoyl-L-alanine amidase |
|---|
| Protein accession | YP_001916420 |
|---|
| Protein GI | 188584875 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0860] N-acetylmuramoyl-L-alanine amidase |
|---|
| TIGRFAM ID | [TIGR02883] N-acetylmuramoyl-L-alanine amidase CwlD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.333013 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGATTCTTA TAATGGATAA GAATAAACTT GTCAAATATG TGAAATATTC AGCTATAATT
TGTTTGTTAA TATTAACGGC GATAATTGGA TTTAAATTTC TGAACTCCAG AACAGAAGTT
CAACATGGTA AGGAAATTAA TATATCTACT GATGACTATA CCGAACCCTT TGAAACTATC
GAAAATGTAG AATTACCTTT ACAGGGATTA GTGATTGGAG TGGATCCCGG CCATGGAAGC
TATGATCCGG GTTTTTTTAC TGAGGGAGTG AGAGAAAGTG ATATTGTCCT GGATATTTCA
TTAAAATTAA GAAGGCTCTT AGAACAAGGC GGAGCAGAAG TTGTTATGAC TAGGGAAACT
GATGAATTAA TGGTGGAAAA TGATAATGGA ACCCAAAGAG AAGAACTTAG AAAAAGGTCT
AAATTATTTT TAAACCAGGA TGTAGATTTA TATGTAAGTA TTCATGGTAA TACTGTAGCT
AGTCCTATTT GGAGGGGAGC GCAAACTTTT TTCTATCCAG AAGAAACAGA AGAAGCAGAA
GAAAACGATA ATAAATGTAA AAATTTTAAT TTGGCTATTT GCATTCAAGA TGAACTGCAG
CGTGTATTAG CCAATACAGA CAGACCTGTA CGAATAGGTA ACTATTACAT TTTGCGAGAA
TTATCAAAAC CGGGAGTCTT GGTAGAAGTT GGATTCTTAT CTAACCCCCA CGAGAGGAAA
TTACTCCAGG ATGAAGAATA CCAGGAGTTG ATTGCCTGGT CCATATATCT CGGTATTATT
AAATATCATC ATACAGATAT GTAA
|
|---|
| Protein sequence | MILIMDKNKL VKYVKYSAII CLLILTAIIG FKFLNSRTEV QHGKEINIST DDYTEPFETI
ENVELPLQGL VIGVDPGHGS YDPGFFTEGV RESDIVLDIS LKLRRLLEQG GAEVVMTRET
DELMVENDNG TQREELRKRS KLFLNQDVDL YVSIHGNTVA SPIWRGAQTF FYPEETEEAE
ENDNKCKNFN LAICIQDELQ RVLANTDRPV RIGNYYILRE LSKPGVLVEV GFLSNPHERK
LLQDEEYQEL IAWSIYLGII KYHHTDM
|
|---|
| |