| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0228 |
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| Symbol | |
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| ID | 6315986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010718 |
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| Strand | + |
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| Start bp | 237962 |
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| End bp | 238723 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642642611 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_001916415 |
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| Protein GI | 188584870 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000000000401865 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.634585 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGACAACA TTAAGCTTAC AATTGCCTAT GATGGGTCAA ATTATCATGG ATATCAATTA
CAAGAAAATG CAGTTACTGT TCAAGAAAAG CTAGAAAAGG CCTTAAATAC AGTTTATTAT
CCATATAAAA TAACCCCTTA CAGTGCTTCG AGAACTGATT CGGGAGTACA TGCAAAAGGA
CAGGTAGCCA ATTTCTTCGC TCCTAAACAG ATCCCAATTC ACAAAATTCC TTTAGCTTTA
AATACTAACT TACCCAATGA CATTGCTATT ATTAATGCTG AGGTAGTGGG TTCTAATTTT
CGAGCTCGTA GAGATGCTAT CAAAAAAGAA TATCGTTATT ATGTTTACCA TGCACCTTAT
ATGGACCCTT TTTGGAGAAA TTATGCTTTA CATTATCGGG AACAAAATTT GGATTACACA
AAACTTCAAC AGGCGGCAAA TGACTTTATA GGGAAGCATG ATTTTTCCCC CTTTAGAGCT
ATTCAAGGAT CAAACCCATC GATTGACCCT GTGAAAGAAA TTTATGAATT TGATATCGAT
GTAAATGCCG GGGAAGATGG TAATTTGATA ATTTTTAAAG TAATCGGAAA TGCCTTTTTA
TATAAAATGG TGAGAATACT AGTAGGTACT TTACTACAAA TTGGTAATGG AAAACTAGAG
ATCAATGCAG TCAAAAAGGC ACTCCAGACG GGAGACCGTT TGTTTGTAGG GCCAACTGCC
AGTCCTCAGG GACTGGTATT ACAGCAAATT TGGTATCCTT GA
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| Protein sequence | MDNIKLTIAY DGSNYHGYQL QENAVTVQEK LEKALNTVYY PYKITPYSAS RTDSGVHAKG
QVANFFAPKQ IPIHKIPLAL NTNLPNDIAI INAEVVGSNF RARRDAIKKE YRYYVYHAPY
MDPFWRNYAL HYREQNLDYT KLQQAANDFI GKHDFSPFRA IQGSNPSIDP VKEIYEFDID
VNAGEDGNLI IFKVIGNAFL YKMVRILVGT LLQIGNGKLE INAVKKALQT GDRLFVGPTA
SPQGLVLQQI WYP
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