| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0116 |
|---|
| Symbol | |
|---|
| ID | 6314658 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 133411 |
|---|
| End bp | 133905 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 642642489 |
|---|
| Product | transcription elongation factor GreA |
|---|
| Protein accession | YP_001916303 |
|---|
| Protein GI | 188584758 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0782] Transcription elongation factor |
|---|
| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.000000184686 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.00194606 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCTAGTA GAGAAGTATC TAATAATGGT AAAGAAGTAG TTTTAACTCG CGGAGGGTAC
GAAGAGTTAG AAGAAGAATT AGAGCATTTA AAAACAGTAA GAAGAAAAGA AGTAGCTGAA
AGAATAAAAA CGGCCATTTC TTTTGGTGAT ATTAGCGAAA ACAGTGAGTA TGATGATGCA
AAAAATGAAC AGGCATTCAT TGAAGGAAGA ATTATTACTT TGGAAAAAAT GCTTAGAAAT
GCTAAAATTG TAGATAAAGA CGAAACGGAT AATAAAGTTG TCTCAATCGG TAATACAGTT
GTCTTAAAGG ACCTTGAATA CGATGAAGAA GTTGAATACA CCATCGTTGG CTCCGCTGAG
TCTAATCCTA CAGATCAAAA AATATCAAAT GAATCACCGG TGGGAGAAGC TATTATTGGA
AAAAAAGTTG GTGAAGTTGT TGAAGTAAAA GTGCCAGCAG GTGTAATAGA ATATGAAATA
GTTGATATTA ACTAA
|
|---|
| Protein sequence | MASREVSNNG KEVVLTRGGY EELEEELEHL KTVRRKEVAE RIKTAISFGD ISENSEYDDA
KNEQAFIEGR IITLEKMLRN AKIVDKDETD NKVVSIGNTV VLKDLEYDEE VEYTIVGSAE
SNPTDQKISN ESPVGEAIIG KKVGEVVEVK VPAGVIEYEI VDIN
|
|---|
| |