Gene Nther_0093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0093 
Symbol 
ID6316364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp109303 
End bp110685 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content35% 
IMG OID642642466 
ProductFe-S cluster domain protein 
Protein accessionYP_001916280 
Protein GI188584735 
COG category[R] General function prediction only 
COG ID[COG4624] Iron only hydrogenase large subunit, C-terminal domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.000835421 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGAAGCCTT ATTATCATTC AGTAAGACTA AAAGAAGAGT CTTGCATTGG ATGTGTACAC 
TGTCTCAAGT TCTGCCCTAC CCAAGCCATA AGAATAAAAG GAGGACGGGC AGAGATCCTA
AAGGAAAGAT GTATCGACTG TGGGGGCTGT ATTCAAATTT GCCCTAACAA TGCCAAAATT
GCAGAATCAG ATAATATTTC CCAAATTGAT AATTTTCAAC ATAAAGTCGC TGTAGTTCCT
CCTTCAGTCT TAGTGCAGTT TCCCAAAGAT GTATTACCAA AAGAGGTTTT TCGAGCTTTT
CTAGATTTAG GCTTTGATAA AGTGTTTTCA ATTTCTCTTG GTGGAGAATG GTATTCATAT
GAAGTAAATA AAATTTTAAA CTCAAATTTT TCAAAAAAAC CATTAATTTC TACTCATTGT
CCAGCTATTG TAAGATTAAT CCAAGTAAAA TTTCCTGAAC TTGTAGGCAA TTTAGTTCCT
GTAGATACAC CTCTGGATAT TACAGGAGAT ATAGCTAGAG AATATCTAAA AAACCAACTT
AATTTAGATG ATGAAGATAT CGGTATTTTT TTAATTTCAA TGTGCTCTGC AAGAGTAACA
GCTGTCAAAA GCCCAGAGGG CCGACCTTTT TCTTCACTTA ATGGCGTACT GTCTTTAATT
GATATTTATA GCCAACTATT AAAAAGTGTA AAAGCTACCA ATAGTGAAGA AGAACAAATT
TCAAATAACC GTAAAAACTT GGATGGAGCC ATTTATCCAC CAGAGCTAGG TATTGGTGTT
GGGCACGATG TAACGGGATG TGACCAAACA GGAATAGAAT CTAATGATTG TCTTTCAATT
AGTGGGATTA ATAATGTGAT GGATGTTTTA GAAGAAATCG AGCTAGGAAA AATATCAGAA
CTAGATTATA TAGAATTGCA TTCCTGTTAT GGAGGCTGTG TTGGAGGGGT TTTAAATGTA
GAAAATCCCT TTGTCTCCAA GGTGAGAATG AACAAGATAA TTAACGAAAT GGAAAAAGAT
AGCTCATATC TAGATGGAGT AACACAGAGT TTACCAAAAA GCTTTAATAT CAGAAAAATT
AATATTCAGC CAAGACCATT AGAAGGGCTT TCAAATAGCA TCAGCCAATC GGTTAAAAAA
CTATCTGAAA TTGAAAAACT ATTGAACTGT CTACCACAAC TAGATTGTGG AGCTTGCGGT
TCACCTTCTT GCAGATCTTT AGCGGAAGAT GTGGTGCTTC AAAGAGCAGA TATGAAGGAC
TGTGTTTTTT ACTTGCTTGA TAATGTTGCA AGCTTAACTC AAGAAGCTTA TACCATGGCA
AAAGGAATTC CACATGTTCT TAAAATGAGG CATAAGGGAC TTTATAACTT TAGAAAAGAT
TAA
 
Protein sequence
MKPYYHSVRL KEESCIGCVH CLKFCPTQAI RIKGGRAEIL KERCIDCGGC IQICPNNAKI 
AESDNISQID NFQHKVAVVP PSVLVQFPKD VLPKEVFRAF LDLGFDKVFS ISLGGEWYSY
EVNKILNSNF SKKPLISTHC PAIVRLIQVK FPELVGNLVP VDTPLDITGD IAREYLKNQL
NLDDEDIGIF LISMCSARVT AVKSPEGRPF SSLNGVLSLI DIYSQLLKSV KATNSEEEQI
SNNRKNLDGA IYPPELGIGV GHDVTGCDQT GIESNDCLSI SGINNVMDVL EEIELGKISE
LDYIELHSCY GGCVGGVLNV ENPFVSKVRM NKIINEMEKD SSYLDGVTQS LPKSFNIRKI
NIQPRPLEGL SNSISQSVKK LSEIEKLLNC LPQLDCGACG SPSCRSLAED VVLQRADMKD
CVFYLLDNVA SLTQEAYTMA KGIPHVLKMR HKGLYNFRKD