Gene Nther_0082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNther_0082 
Symbol 
ID6316275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNatranaerobius thermophilus JW/NM-WN-LF 
KingdomBacteria 
Replicon accessionNC_010718 
Strand
Start bp99610 
End bp100155 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content43% 
IMG OID642642455 
Productmembrane protein 
Protein accessionYP_001916269 
Protein GI188584724 
COG category[S] Function unknown 
COG ID[COG4684] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.224712 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.42558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCATAGCA GAGCGATAAT TAATAGCAGT ACTCGAAAAC TTGCTGTAGG CGGATTATTG 
TCGGCGATCA GCATAGTTAT GAGCTTTACC CCCCTTGGTT ATGTACCAGT GCCTACACCC
GCCGGTTCAG TCACTACCAT GCATGTTCCA GTCATAATTG CGGCATTACT AGAAGGGCCT
TATATAGGAA CTATGGTAGG CAGTATTTTT GGATTAACGA GTTTTATCAG AGGGGCAAAT
TTCTTTGTAG ATCCGGTGGT CGCCATTATC CCTAGGTTGT TTATTGGGAT GGGGTCTTAC
TTTGCAATGA GGTTAACAGC TAGGCTTCTA TCTGATAAGA CAAAAAGAGA TTTTCTCCCC
TATGCAGCTG GAGCTTTTAC GGGAACAGTT ATAAACACAG CGGGGGTTTT ATCACTTGCA
ACATTACGTG GGTATTTACC TGGCTATGCA GCAGCAGGTG TGGCTGTCAG TCATGGAATA
CCTGAAATCA TTGTTGCAAT AATCCTTACT ATTTTAATTT GTCGCACAGT AAGGAAATTG
TATTAA
 
Protein sequence
MHSRAIINSS TRKLAVGGLL SAISIVMSFT PLGYVPVPTP AGSVTTMHVP VIIAALLEGP 
YIGTMVGSIF GLTSFIRGAN FFVDPVVAII PRLFIGMGSY FAMRLTARLL SDKTKRDFLP
YAAGAFTGTV INTAGVLSLA TLRGYLPGYA AAGVAVSHGI PEIIVAIILT ILICRTVRKL
Y