| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nther_0004 |
|---|
| Symbol | |
|---|
| ID | 6314824 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Natranaerobius thermophilus JW/NM-WN-LF |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010718 |
|---|
| Strand | + |
|---|
| Start bp | 3167 |
|---|
| End bp | 4327 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 642642366 |
|---|
| Product | DNA replication and repair protein RecF |
|---|
| Protein accession | YP_001916191 |
|---|
| Protein GI | 188584646 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1195] Recombinational DNA repair ATPase (RecF pathway) |
|---|
| TIGRFAM ID | [TIGR00611] recF protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.00780262 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 67 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAAATTAA CAGAATTGTG TCTTAAAAAT TTTCGCAATT ACTCTAATCT AAAACTGAAT
TTTAAAAAGC CGATTATATT GTTTTTTGGT GCTAATGCCC AAGGTAAAAC AAACTTACTT
GAAGCTATAT ATTATCTGGC TACAGGTAAA TCCCATAGAG CTCAAAAAGA AAAAGAATTA
ATCCGCTGGG AAACCAGCGG ATTTTACCTA AAAGGAGAAT TAGAAAAGGA ACAAGCCCAA
TACACTTTAG AAATAATTAC AAACTATCAG AATGGGAAAA ATAAAAATTT GAAAGTTAAT
AATTTATCCC AAACCAATAC AAGAAATTTC TTAAAAACCA TGAATGTAGT TATTTTTAGT
CCCGAAGATT TAATGCTTGT TAAAGGGACC CCAGATAATA GGAGAAGATT TATTGATCAA
GAAATAACTC AGGTGGATCC CAGTTATGAC TTCTATTTGA AAAATTATTT TAAAGCTTTG
AGACAGAGAA ATAAACTATT GAAAACTTAT CAAGATAAAA ACACCTTGGC ACAACATTTA
CCTCCTTGGA ATCAACAGTT AGTCCATTAT GGTTCTAAAA TTATACTAAA AAGAGAAGAA
GTTATTCATA AAATAAGATT GCTTGCCAGG TTAATTTATC GCAAAATAAC AAATCAAACT
GAAAATTTAG AGCTAGATTA CTCCCCTTCA TTGGAATTTG AAGATTGCAA GTTTAGAGAA
CAGCTTTCGG GAGAAAAATT AGCCCATAAA TTTTTAAATA CTTTAAACGA AAATCTACAA
AGTGATATTG AGAAAAGAAC AACTTCCATT GGACCTCACA GGGATGATTT AATTTTTAAA
ATAAATAATA AAGATGCCAG GCAGTTTGGT TCCCAAGGAC AACAACGTAC TACGGTTTTG
GCTCTTAAAA TGGCGGAATT AGAAATGATT AAAGGAGAGA AGGGTGAATT CCCTATTTTA
CTATTAGACG ATGTTTTGAG TGAATTAGAT GACAATAGAA AAAAACATCT GTTAAATTTA
ACAGAAGGAC GAGTGCAAAC ATTCGTAACT AGCACTTCTA TGGAAGATTT CAATGGTGAC
GTGGATATTA AAGCTAAATC CCAGGTTTTT CGAATTGATA ACGGTGAGGC GGTGAAATTA
AATGCAGGGA ATCAGGAATG A
|
|---|
| Protein sequence | MKLTELCLKN FRNYSNLKLN FKKPIILFFG ANAQGKTNLL EAIYYLATGK SHRAQKEKEL
IRWETSGFYL KGELEKEQAQ YTLEIITNYQ NGKNKNLKVN NLSQTNTRNF LKTMNVVIFS
PEDLMLVKGT PDNRRRFIDQ EITQVDPSYD FYLKNYFKAL RQRNKLLKTY QDKNTLAQHL
PPWNQQLVHY GSKIILKREE VIHKIRLLAR LIYRKITNQT ENLELDYSPS LEFEDCKFRE
QLSGEKLAHK FLNTLNENLQ SDIEKRTTSI GPHRDDLIFK INNKDARQFG SQGQQRTTVL
ALKMAELEMI KGEKGEFPIL LLDDVLSELD DNRKKHLLNL TEGRVQTFVT STSMEDFNGD
VDIKAKSQVF RIDNGEAVKL NAGNQE
|
|---|
| |