| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4948 |
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| Symbol | |
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| ID | 4595324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008697 |
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| Strand | + |
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| Start bp | 283347 |
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| End bp | 284357 |
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| Gene Length | 1011 bp |
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| Protein Length | 336 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639772730 |
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| Product | bile acid:sodium symporter |
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| Protein accession | YP_919390 |
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| Protein GI | 119714248 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0798] Arsenite efflux pump ACR3 and related permeases |
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| TIGRFAM ID | [TIGR01593] toxin secretion/phage lysis holin |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.805052 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00366916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGTCAGTAG TGGGTGCCCT GGAGCGGCAC CAGATCTCCA TCTACCTCGG CGGCCTGGCG
GCTGGAGCTG CCGTCGGACT GGCGTGGCCC GAGAGCTCGC ATCCGCTCGA GCTCGGCATC
TACCCGGTAC TCGGGACCCT GCTCTACGCG ACGTTCCTGC AGGTGCCGTT CACCAAGTTG
GCCGGCGCGT TCCGAGATAC CCGGTTCCTC GCCTCAGCGC TGGTCTTGAA CTTCGCGGTC
GTGCCGCTGG TGGTCGGCGC GCTCACGGCC TTGGTGCCGC TGTCCCAGGC GGTGCTCCTC
GGTGTCCTGC TGACCCTGCT GACGCCGTGC ATCGACTACG TGATCGTGTT CTCCGGGCTC
GCTGGCGGCG ACAGTCAGCG CCTGGTCGCC GCCACGCCGC TGCTGATGCT GGCCCAGCTG
CTGGCCCTGC CGGTCCTGCT GTGGCTGTTC GTAGGCCCTG AGCTGGCCGA CATCGTCGAG
GTCGGGCCGT TCCTAGAGGC GTTCGGGGTC CTGATCGTGC TCCCGCTCGC GTTGGCCTGG
GCCACCGAAG CCCTCGCGGC ACGCCACCGG ACGGGTCAGG CGATCACCGG CGCGATGACC
GCGGCGATGG TTCCCCTGAT GGCCGCCACC TTGTTCGTCG TGGTCGGCAG TCAGGTCCCC
AAGCTCGAGG GTCGGTTCGA CGAGATCATC ACCGTCGTCC CGATCTACGC CGCGTTCCTG
TTGATCATGG CCTTCCTCGG GCTCGCCGCC GCGCGCACCG CTCGACTCGA CACAGGACGC
GCCCGGGCAC TGATCTTCAC CGGCGCCACC CGCAACTCGC TCGTGGTCCT CCCGCTCGCG
CTGGCCCTCC CCGCGGGCTA CGCCATCACC CCGGCCATCG TGGTCACCCA GACCCTCGTC
GAGCTCATCG GGATGCTCGT CTACATCCGA CTCGTTCCGC GGCTGGTCCC GGTAACCTCG
ACACCGAAGA CGGTCAACGA CAGCCGGGAT GGATTGGCTC CAGACGTTTG A
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| Protein sequence | MSVVGALERH QISIYLGGLA AGAAVGLAWP ESSHPLELGI YPVLGTLLYA TFLQVPFTKL
AGAFRDTRFL ASALVLNFAV VPLVVGALTA LVPLSQAVLL GVLLTLLTPC IDYVIVFSGL
AGGDSQRLVA ATPLLMLAQL LALPVLLWLF VGPELADIVE VGPFLEAFGV LIVLPLALAW
ATEALAARHR TGQAITGAMT AAMVPLMAAT LFVVVGSQVP KLEGRFDEII TVVPIYAAFL
LIMAFLGLAA ARTARLDTGR ARALIFTGAT RNSLVVLPLA LALPAGYAIT PAIVVTQTLV
ELIGMLVYIR LVPRLVPVTS TPKTVNDSRD GLAPDV
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