Gene Noca_4902 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4902 
Symbol 
ID4595280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp234467 
End bp235117 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content66% 
IMG OID639772687 
Productresponse regulator receiver 
Protein accessionYP_919347 
Protein GI119714205 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones42 
Plasmid unclonability p-value0.443208 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.676579 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGG TCCTCCTCGC CGACGACCAG TCCCTGCTAC GCACAGGGTT CCGGATGATC 
CTCGGCGCTG AGCCGGACGT CGAGGTAGTC GGCGAAGCCC GGGACGGTGA AGAAGCGGTC
GCGCTCGTCG ACGAGCTGCT CCCCGACGTC GTGCTGATGG ACCTGCGGAT GCCGAACATG
GACGGCATCG AGGCCACCCG CCGCATCACC GCGGCACACG AAGCTGTCCG GGTGGTGGTA
CTGACGACCT TCGACCTCGA CGAGTACGTC TACTCCTCGC TGCGGGCCGG AGCCAGCGCA
TTCCTGCTCA AGGACGCCAA GGAGGACCAG CTGGTCGCGG CGATCCGGGT CGCCGCGGAC
GGGGGATCGC TGTTCTCGCC GTCGGTGACC AAGCGACTGA TCGGTCGGTT CGCCGCACCG
GCAAGTGCGC CGGTTGCAGC GGACCTGCCG GCCCTGACCA ACCGCGAACG CGAGGTATGG
GAACTGGTCG CTCGCGGACT GTCGAACGCA GAGATCACTG AGCGCCTGGT GATCAGCGAG
CACACAACGA AAACCCACGT GGCCAGCATC TTGCAGAAGC TACACGTACG CGGCCGTGTG
CAGGCGGTCG TGCTGGCCTA TGAAAGCGGC CTGGTGCAGC CCGGAAACTG A
 
Protein sequence
MIRVLLADDQ SLLRTGFRMI LGAEPDVEVV GEARDGEEAV ALVDELLPDV VLMDLRMPNM 
DGIEATRRIT AAHEAVRVVV LTTFDLDEYV YSSLRAGASA FLLKDAKEDQ LVAAIRVAAD
GGSLFSPSVT KRLIGRFAAP ASAPVAADLP ALTNREREVW ELVARGLSNA EITERLVISE
HTTKTHVASI LQKLHVRGRV QAVVLAYESG LVQPGN