Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4895 |
Symbol | |
ID | 4595274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | + |
Start bp | 227340 |
End bp | 228476 |
Gene Length | 1137 bp |
Protein Length | 378 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639772680 |
Product | histidine kinase, dimerisation and phosphoacceptor region |
Protein accession | YP_919340 |
Protein GI | 119714198 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.235337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGTCC GGCGGCTGCC GCGCGACCAC CCTCGCGTGG TCGACCTGGT GATCGCCGGT GGCTGTCTGC TGATCCTCAC CGTCGCGCTG CTCACGGACG ACGGGTACCT CTCCGGTCCG CGCTGGGCCT ACCTCACCAC ATCGTGCTTG ATGACAACCC CGCTGGCCTG GCGGCGGAAC GCGCCGCTGA CGTCACTCAC CATCGTGATG ACAGGGCTGG CGGTGCAGGA GCTACTCGTC GACCCGGCAC CGACGATGGA CGACGCGCTC ATCCCGTTAC TGATCTCTGC CTTCTCGGTG GCTGCATACG GCACCCGAAC GACCGCCGGT CTGGGCCTTG GCATCAGTCT CGGCGCCGGA GCGATATGGG TGGGCATCGA TGACATCTTC TTTCCCGTGG TCGCGTTCAG CGGAGCGTGG CTGGCCGGTC GCCTGGTTCA CCATCTGCAA CAGCAGTCAC TGATGGCACG GAACTATGCG GAGGCACTCG AGCGCGAGCG GGCAGCGACC ACCCGAGCCG CCCTGGCCGA GGAACGCACG CGCATAGCCC GCGAGCTGCA CGACGTCGTG TCCCACACCC TTGGCGTCAT GGTCGTCCAG GCGGGTGGCG AACGGCTACA CGCTGCGCCC GGGTCCGGCG CCCACACGGC GCTGGCATCG ATCGAGGAGT CGGGGCGCCT GGCCATGGAA CAGATGCGCA GGCTCCTGTC CATGCTGCGC GAGGAGGCCG ACACGAGGTC CCTCGTGCCA CAACCGGGTC TCACCCAGCT CGACGAGCTG ACCGAGAGTG TGCGCGCCAC CGGTCTCGAC GTGAGCCTCC TGGTGACGGG AGATCCGCAC CCGATCGGCC CCGACCTCGA CGTCTCAGCC TTCCGGATCG TGCAGGAGGC CCTGACCAAC ACCGTGCGAC ACAGCGGAGC GACCCGCGCC GAGATCCACC TGGACTGGGC ATCCAACTCG TTACGGATCG AGGTGAGCGA CAACGGGCGC GGACCCTCGC CCACCCCGAC ACCGGAGGGC CATGGCCTGC TCGGTATGCG CGAGCGGGTC AACCTCTTCG GAGGTGTGCT CAGCACCGGC CGGAGCAACC TCGGCGGCTA CCGGCTCATG GCCCAACTCC CGACCCCGAC GCCATGA
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Protein sequence | MTVRRLPRDH PRVVDLVIAG GCLLILTVAL LTDDGYLSGP RWAYLTTSCL MTTPLAWRRN APLTSLTIVM TGLAVQELLV DPAPTMDDAL IPLLISAFSV AAYGTRTTAG LGLGISLGAG AIWVGIDDIF FPVVAFSGAW LAGRLVHHLQ QQSLMARNYA EALERERAAT TRAALAEERT RIARELHDVV SHTLGVMVVQ AGGERLHAAP GSGAHTALAS IEESGRLAME QMRRLLSMLR EEADTRSLVP QPGLTQLDEL TESVRATGLD VSLLVTGDPH PIGPDLDVSA FRIVQEALTN TVRHSGATRA EIHLDWASNS LRIEVSDNGR GPSPTPTPEG HGLLGMRERV NLFGGVLSTG RSNLGGYRLM AQLPTPTP
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