Gene Noca_4880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4880 
Symbol 
ID4595254 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008697 
Strand
Start bp212067 
End bp213299 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content63% 
IMG OID639772665 
Producthypothetical protein 
Protein accessionYP_919325 
Protein GI119714183 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGCGA ATGATTCCTT CTTCCAGAGG AAGAAGCCTG CTGCGGTGCT CAAGCACGCC 
GTCCTGGCCG AGTACTTCAA CGTCTTCTGC GCAATGGTTG GCGGCTCGTT CTCCGGTCCC
GTCTGGCTGG TGGATGGCTA CGCCGGCCCC GGCACGTACG ACGCGGACGA CGACGGCGAG
ACAGTCACTG GATCGCCGAT CGTCGCGCTG GAGATCGCGG AGAAGGCGGC GCAGTGGAAG
TCGCCTCGCA ACATCCGCTG CGCCTTCATC GAGCAGAAGC CGAACTACCT GAAAAAGCTC
CGATCAAACG TCAAGCCGTT CCAGGAACGC GGCTGCCACG CCCTTGTTCT TGGCGGTGAG
GTTCAAGAGC AACTGCCCAA GGCGTGGGAG GAAGTTGGCA CCAGCCCGGT GCTCACGCTG
CTCGACCCGT TCGGAGTCTC GATGGCACGA GGCATGATGA CCGGCACCCT GCTTGGGCGG
AGCAAGCCAC CGTCGGAGGT GCTGCTCAAT ATCAACGTCG AGGCTGTCTC CCGCCACGGC
GGGTATCTCC AGCGCGGCGC AGGCGGCACG CCGGAGATCA AGCCGGGGCT CTCCAGCCAA
GGCGTGGAGA AGGCTGACCT CTTCTTTGGC GGCAAATGGT GGCGTGCACG GTTCCTGGAT
GCGCGCGACG AAACATCCTC TGCCGCGCTT GCCGCGGCCG CAGTGGTCGA CGAATACCGG
GCTGCGATAG CGAAGGAGAC AGGGACGCTC TCGATCTCTG TACCGATCCG GCGCCGGGCG
AACCGGGCGC CTCTCTTCCT GCTGACGCTC TTCTACCGAC ACGATGCAGC CGGATACAAG
TTCGCGGACG CGGCCGCTCG GGCATCGCGA AAGTGGCGGG ACGCGTATCG CCGCCAGGAC
CTCGACGATT TCTTTGAGAA GCACGACGAG CAGGAGATGC TGCCGATCAT GGGCGACATC
ATCCGCGAGG ACAGCGCGAG CAGATCGGCG GCCGCCGAAC GTGACCTGGA GAGTGACTGC
ATCAGTGCCG TCGCCACGAA CATCCAGGTG TTAGTCGTTC AGTCGACTCA GGTAGCAGTC
GGGCGCAACG TGGTACCGAT CCTGGGGGAT ACCCTCTCGC TAGCTGGTGA GTCGACAATT
CGGAAGGCCT GGGATCGACT CGCTGATGCG GGCTCAGTTG ATCCCCGCGA CAAGAAGAAG
GAATTGTGGA AGCAGTTCAT CGTTAAGCGG TGA
 
Protein sequence
MAANDSFFQR KKPAAVLKHA VLAEYFNVFC AMVGGSFSGP VWLVDGYAGP GTYDADDDGE 
TVTGSPIVAL EIAEKAAQWK SPRNIRCAFI EQKPNYLKKL RSNVKPFQER GCHALVLGGE
VQEQLPKAWE EVGTSPVLTL LDPFGVSMAR GMMTGTLLGR SKPPSEVLLN INVEAVSRHG
GYLQRGAGGT PEIKPGLSSQ GVEKADLFFG GKWWRARFLD ARDETSSAAL AAAAVVDEYR
AAIAKETGTL SISVPIRRRA NRAPLFLLTL FYRHDAAGYK FADAAARASR KWRDAYRRQD
LDDFFEKHDE QEMLPIMGDI IREDSASRSA AAERDLESDC ISAVATNIQV LVVQSTQVAV
GRNVVPILGD TLSLAGESTI RKAWDRLADA GSVDPRDKKK ELWKQFIVKR