| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4831 |
|---|
| Symbol | |
|---|
| ID | 4595434 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008697 |
|---|
| Strand | + |
|---|
| Start bp | 160134 |
|---|
| End bp | 161051 |
|---|
| Gene Length | 918 bp |
|---|
| Protein Length | 305 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639772618 |
|---|
| Product | CdaR family transcriptional regulator |
|---|
| Protein accession | YP_919278 |
|---|
| Protein GI | 119714136 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3835] Sugar diacid utilization regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.558318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCCAAGA ACCGGGGTCA GGGCCCTCCC GCGGCCGACG TACTCGGTGT GCTCGCGCTG
GTCGATCCCG GCCAGCAAGC CGGTGAGCAG GAACAGATCG CCATAGAACA CGGCGCAACA
GTGCTCGCCA TGGAGCTGGC TCGCCTCCGC AGCTTGGCTG AGACCGAGCT CCGCATCCGA
CGCGACCTGG TGGACGAGCT GCTCACCGGG ACCGAGGAGT CGAGCGCACT GGCGCGCGGG
CAGGCGCTGG GACACGACCT GGAGAAGCCG CACCGTGTAG TGGTCGTCGA AGGCCACGGG
CGAGCCCACG ACAGCAATGC GTTCTTCCTC GCCGTACGAC GAGTCTCACG CCAGCTGCAC
GCCGGGAGCC TTCTTGTAGC CCGAGGGGAG TCGGTCGTTG TCCTGTCCGA GGCCGACCTG
GACTGGGAGA AGTTCCGCGG CCTGGTGATG ACAGAGCTCG GAGGTGGACG CTGCCGACTC
GGCGTCGGCG ACTATTGTCA CGGCCCCAAA GACTTCCCAC GGTCCTACCG AGAGGCTCAG
ATCGCCCTGC GCATGCAGCG TGTGGCCAAG GCGGAGGACC GCGCAACGTC GTACGCGGAT
CTCGGCGTCT ACCGGATCCT CGCCGAGGTC GAGAACCCGA TGGCTGTCGA GCGGTTCGTG
CGCCATTGGC TGAACGCGCT CCTTGAGTAT GACGCCCGCA AGGGCTCCGA ACTCGTCCAC
ACCCTGAGTC GCTACCTCGA GTGCGGCGGG AGCTACGAGG CCACGGCCGC GGCACTGTCG
GTCCACCGCA GCACCTTGAA GTACCGGCTC CAGCGGATCC GCGAGATCTC AGGCCACGAC
CTGACCCACC CCGACACCGC CTTCAACCTC CAGCTGGCCA CTCGAGGCTG GCAGACCCTG
CAAGGCCTGC AGAGCTGA
|
|---|
| Protein sequence | MSKNRGQGPP AADVLGVLAL VDPGQQAGEQ EQIAIEHGAT VLAMELARLR SLAETELRIR
RDLVDELLTG TEESSALARG QALGHDLEKP HRVVVVEGHG RAHDSNAFFL AVRRVSRQLH
AGSLLVARGE SVVVLSEADL DWEKFRGLVM TELGGGRCRL GVGDYCHGPK DFPRSYREAQ
IALRMQRVAK AEDRATSYAD LGVYRILAEV ENPMAVERFV RHWLNALLEY DARKGSELVH
TLSRYLECGG SYEATAAALS VHRSTLKYRL QRIREISGHD LTHPDTAFNL QLATRGWQTL
QGLQS
|
|---|
| |