Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4785 |
Symbol | |
ID | 4595382 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 102420 |
End bp | 104594 |
Gene Length | 2175 bp |
Protein Length | 724 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639772572 |
Product | helicase domain-containing protein |
Protein accession | YP_919232 |
Protein GI | 119714090 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.0599344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.582969 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGATGA TCGACCCGCG CCGATTCTCC CGTGGCGCGC TGCTGGACTC CAAGGCACTC AAGGACGTCA CCGTCCGACG GCTCAAGACC GACCTGTCCG GCAAGGGCTT CAAGAAGCGC AAGGTCGACG CCCTCGACTT CACCCCGTCG GACAGTGAGC AGGAGAAGTT CTCTCTGCTG GACGAGATCG TTACCAAGAG CGCCAAGCAG AACGGCACCA AGCCGACCGG CGACATCGTG ACGATGTTGT TGAAGAAGAG GTTCTTGTCC AGCCCCTTCG CGTTCGGCAT GACCCTGAGC CACTACTTGT CCTCGAGGGC CGGGCGTGGC CTGTCCGAGG ACGACTACGA CGACGTCTTC GGTGAGGGTC AGGCCGACGA GGAAGAAGGC CTGTGGGAGC AGGACGAGGC CGAGCGACTC CGCGAGTCCA AGGGCTCTGA CCCGTTGGTC GCCGCGGAGC CCGGCCAGCT CGAATCACTT ATGGAGTGGG GGTTGAGCTA CGAGAGCCGC GCCGACTCCC GCCTCGACCG CCTCATCGGA TTCCTCGACG CGGTGTGCCG CCCGGACGGC AAGAGCTGGT CCAACGAGCG CGTCGTGATC TTCACCGAGT ACGCCCACAC CGTCGACTGG CTTACCCGCG TCCTGCGCCA GCGCGGCTAC GTCGAGGACC GACTGGCCGT GATCCAGGGC TCGACCAAGC CTGAGGACCG CGAATACATT CGCTCGCAGT TCACCGCCGA TCCGGCCAAG GAGCTGGTCC GCGTCCTGCT CGCCACCGAC GCCGCCGGTG AGGGCATTGA CCTCCAGACC CACTGCCATC GGCTGGTGAA CTTCGACATC CCGTTCAACC CGTCCCGGTT GGAGCAGCGC ATCGGCCGCA TCGACCGCTA CGGCCAGACC GATGAACCCC AGGTCTTCCA CTTCGTCCCC GTCGCAGGCG CCTCTACCTA TGCGGCGGAC GTGGACTTCA TGTCGCGCAT CGCCCGCAAG ATTGCCCAGG TCCAATACGA CCTCGGCTCG GCCAACCAAG TCGTCGGCGA GGAGATCCAG ACGCACTTCG CCCGCCGCAC CCCTGCCAAG GCGAAGGCCA AGGGAGTCGA CACCAACGAG GTCATCAACG CCGCGCTTGC CGGCGGGTTG GAGCTGAACA CTCGGCTGAC CCAGTTGGAG GTGGGGTACG ACGCCTCCCG CACCGAGATG CACCTCGACC CCGCCAACCT TCGTCGCGTG GTCGACACCG CCCTGCGGAT CAACCACCAG TCCCCGCTCG TGCCCAACCA CAAGTTCGCC CAAGACACCG ACGCCGAGGT GTACGACCTC CCGACCCTGA CCACGGGCTG GCATGACACG CTGCGAGGGC TCGACACTCG ACTCAAGCCC GGTGTGCAAC GCCCGATCAC GTTTGACGCC AACGCAGCCG AGGGCCGCGA CGATCTTGTT TACGTTCACC TCGGGCACCC GATCGTCCAG AAGGCGCAGC GCCTGCTGCG CCGATCCCTT TGGAGCGTCG ATTCGCCACT AAGTCGCGTC ACTGCCGTTG TGGTCGATGA CCTGGAGGAG TCCTTCGTCG CGGCCGTCAC CCGCATGGTC CTCGTTGGGC GAGGCGGCAT CCGCCTCCAC GAAGAAGTGT TCCTCGCCGG CGTTCGTGTG AGGGGACGCC GTGCGATGGC CGAGGAAAAG GCCGAGGCCG CGCTCGACGA CGCACTCGAC CGCGAGCGGC TGGCACTGGC CGACTCGCAG GTGCGCGACC AACTCTGCGA CCTATGGAAC GTGCCCGACG CACCGCTGCG ACTTCGCTTG GAAGAGTCGA TGCAGGCTCG CGCAGGACGT CGCCACGAGC TCGTCATGGA ACAGCTCACC AAGCGGCAAG AGGCCGACAC CCAACGCGCC CACGAGATCT TCGCCGCCTT CCGCACCAAC CTCCGCGAGT CGCTCGCGGC GCTCAAGGCC GCCGAAGACG AGGCCCAAGG GCAGTTGTTC TCCGACCCCG ACCAGCAGCG CCAGTGGAGG CGTGACGTCG AGGCGATGAC CCGGCGTCTC GAAGAGCTTG ACGACGAAGA AGCACGCGAG ATCGCCGCCA TCACCGACCG GTATGCCGGG GTGAAGCCAC ACACCACTGC CGCAGCGGTC GTGTTTGCGC TGACCCGCTC CGACGCCGAC GGGTGGATCG ACTGA
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Protein sequence | MEMIDPRRFS RGALLDSKAL KDVTVRRLKT DLSGKGFKKR KVDALDFTPS DSEQEKFSLL DEIVTKSAKQ NGTKPTGDIV TMLLKKRFLS SPFAFGMTLS HYLSSRAGRG LSEDDYDDVF GEGQADEEEG LWEQDEAERL RESKGSDPLV AAEPGQLESL MEWGLSYESR ADSRLDRLIG FLDAVCRPDG KSWSNERVVI FTEYAHTVDW LTRVLRQRGY VEDRLAVIQG STKPEDREYI RSQFTADPAK ELVRVLLATD AAGEGIDLQT HCHRLVNFDI PFNPSRLEQR IGRIDRYGQT DEPQVFHFVP VAGASTYAAD VDFMSRIARK IAQVQYDLGS ANQVVGEEIQ THFARRTPAK AKAKGVDTNE VINAALAGGL ELNTRLTQLE VGYDASRTEM HLDPANLRRV VDTALRINHQ SPLVPNHKFA QDTDAEVYDL PTLTTGWHDT LRGLDTRLKP GVQRPITFDA NAAEGRDDLV YVHLGHPIVQ KAQRLLRRSL WSVDSPLSRV TAVVVDDLEE SFVAAVTRMV LVGRGGIRLH EEVFLAGVRV RGRRAMAEEK AEAALDDALD RERLALADSQ VRDQLCDLWN VPDAPLRLRL EESMQARAGR RHELVMEQLT KRQEADTQRA HEIFAAFRTN LRESLAALKA AEDEAQGQLF SDPDQQRQWR RDVEAMTRRL EELDDEEARE IAAITDRYAG VKPHTTAAAV VFALTRSDAD GWID
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