Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4709 |
Symbol | |
ID | 4595217 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008697 |
Strand | - |
Start bp | 8877 |
End bp | 10412 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639772498 |
Product | hypothetical protein |
Protein accession | YP_919158 |
Protein GI | 119714016 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3451] Type IV secretory pathway, VirB4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.0831911 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGGCGA CCAAGACCCG CGCGCGCGGC GGGGCGAAGA ACGCACGGCC GGCGTCGCGG ACGATCGACG ACCTGCTCTC GGACTTCGGG ACCACGATGC CCCGCAAGGC GGCTCCGGTC GCGGAGCCCC CGGCGGAGAA GCTGTTCCCC GGTTCAGTCA AGGCCAACGG CGTGCGCCGG ATGGGGCATG GATGGGCGCC GACGATGCCG CCGCTGGCCG GCTACCAGAT GACCTCGGAG GAGACCCCGG TCCTGTGGCC GCTGATCTCC GGTGACGGGC TCCCGCCGTG GGGGGCCGAG ATGGGCTACG ACGTGCTCTC GGGCGGCAAG TTCTACTGCG ACCCGATGGG CTGGGTGCTC GACGACTCGA TCCCGGTCAC CAACCCCAAC ATCTTCATCT TCGGCAAACC GGGCCGCGGG AAGTCCGCCA CGGTCAAGGC GTTCATGCTC CGCATGATCC GCTACGGCTA CCGGTCCCTG GTGCTCGGCG ACGTCAAGGA CGAGTACGAG GACCTCGCCC GGTTCCTCGG CGTCGACCCG TTCCGCATCG GACCCGGTCT CGCGGGCCGG ATCAACCCGC TCGACCTCGG GCCGCTCGGC GTTGACTGGG ATAAGCAGAC CCGCGAAGAG CAGCACCGCC GCGCGAACGT GATCTTCAAC CGTTGGCTGT TCCTGATCCG GGGCCTGATC GGCTCCCAAG GCGTGACCTT CACCCCGACC GAGGAGCGGG TCATCAACAA GGTGCTGCGG CACCTGACCG GCTGGTCTGT CGGTGCCTCC CAGCTCAAGC CGGTCACCAT CCCCAAGGTG TGGGCCGCAC TGGACTCGCC CACCAAGGAA CTGGTCTCGG ACTGCCGCTA CTCCTCCGAG CAGGCCTTCT ACGACGGCAC CCGGCCGCTG CGCGACGCTC TGGGTGCCCT GTGCGAGGGC TCGCTGCAGG GCATGTTCGA CACCGAGTCG ACCTTCCACC CCGACTGGCG TGCACCGATC CAGACGCTGT CGCTGCGCTC GCTCCACGAG ACCGGCAACA AGGTCGCCGT GGGCATCGCT CTGATGTGCC TCAACTCCTG GGGTCAGGGC ATGCGGGAGA CCGCTCAGGC GGGCGATCGG CGGATCGTGC TCCGCGACGA GGCCTGGCTG CAGACCCGCC TGTCGCTGGA CGCGGTCATG GCGCTGGACG CCAACCTGCG GCTCTCCCGC ACCGAAGGCG ACATCCAGCT GGTGACCTAC CACAAGCCGT CCGACCCGCT CTCGGCCGGC GACGAGGGCA GCCAGGCCGC CCAGATCGCC AAGGACCTGC TCAACCTCTC CGACGTCCGA ATCCTGATGG GCCAGGACGA GTCGGTCGCC GACGAACTCG GCCGCCTGAT GGGCCTCTCG GACATGCAGC AGAGCGTGAT CACCAACTGG GCGATGCAGG AGAAGGGCCG CGCCCTGTGG ATGGTCGGCG ACCAGCGGTA CAAGGTCCAG ACGCTGCTCA CGCCTCTCGA AAGGCGGCTC ACGTACACCA ACGACGCGAT CGACCCGGCG GCGTGA
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Protein sequence | MAATKTRARG GAKNARPASR TIDDLLSDFG TTMPRKAAPV AEPPAEKLFP GSVKANGVRR MGHGWAPTMP PLAGYQMTSE ETPVLWPLIS GDGLPPWGAE MGYDVLSGGK FYCDPMGWVL DDSIPVTNPN IFIFGKPGRG KSATVKAFML RMIRYGYRSL VLGDVKDEYE DLARFLGVDP FRIGPGLAGR INPLDLGPLG VDWDKQTREE QHRRANVIFN RWLFLIRGLI GSQGVTFTPT EERVINKVLR HLTGWSVGAS QLKPVTIPKV WAALDSPTKE LVSDCRYSSE QAFYDGTRPL RDALGALCEG SLQGMFDTES TFHPDWRAPI QTLSLRSLHE TGNKVAVGIA LMCLNSWGQG MRETAQAGDR RIVLRDEAWL QTRLSLDAVM ALDANLRLSR TEGDIQLVTY HKPSDPLSAG DEGSQAAQIA KDLLNLSDVR ILMGQDESVA DELGRLMGLS DMQQSVITNW AMQEKGRALW MVGDQRYKVQ TLLTPLERRL TYTNDAIDPA A
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