Gene Noca_4623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4623 
Symbol 
ID4596079 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4900595 
End bp4901878 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content72% 
IMG OID639779232 
ProductYibE/F family protein 
Protein accessionYP_925805 
Protein GI119718840 
COG category[S] Function unknown 
COG ID[COG5438] Predicted multitransmembrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0949625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGCTG GGCATGCGCA TCGCGCCCAC CGCGGGCACC GGCACAGCCA GGCTCCCGGA 
CCGGTACCCG GTCACGGTCC TGGCCACGGT CATGGCGGCG CGGGCGCGGA GGTCGAGATC
TCCCGCGGCC CGCGCACGGT CCTGCTCTCG GCGCTCGTGC TGGCGGCCGC CGTGGCGATC
GCCGGGCTGG TGCTGCTCTG GCCGAACGGG TCCGAGGTCG ACAAGATCAC CGAGAGCGTG
CCGTTCGCCG CTCCCGGCGT CACCTTCCCG AACGCCGAGG TCGATCGGGT GCACCCGCCC
TGCGCCGGCC CCGGAGACCG GTCGGAGGAC TGCGGCCTGC TGGACGTCAC CGTGGTGGAA
GGCCCCGGGA AGGGCGACCA CGCGTCGGTC CGGGTCGCCC CGCACGTGGC GGACTCCGGC
CTGCAGCGCG GTGACGAGGT GAAGCTGCAG CGCACGCCCG GGCAGGACGG CGGGGACACG
GCGTACGCCT ACTTCGGCAC CGACCGGAGC ACCCCGCTCT TCGTGCTGCT GCTGGTGTTC
GTCGGCCTGG TGCTGGTGGT CGCGCGGTGG CGCGGGCTCT TCGCGCTCGT GGGCCTGGCG
TTCAGCGGGC TCGTGCTGTG GGAGTTCGTG CTCCCGGCGC TGCTCACCGG CGAGTCCGGA
CTGCTGGTCG GCCTGACCGC GGCCGCCGCG ATCATGTTCG TGGTCCTCTA CACGACCCAC
GGGTTCTCGC TGCGCACCAG TACGGCGTTG GCCGGCACGC TGGTCGGGGT CGGGGTGACC
GCGGGCCTGG GGGTCTTCGC GACCCGCGCG ACCCGCCTCA CCGGCATGAC CGACGAGACC
GCCGGGATCC TCTCGAGCCT GGTCGGCGGG CTGGACTTCC ACGGGCTGTT CGCCTGCGCG
ACCGTGATCG CCGGGCTGGG CGTCCTCAAC GACGTCACGA TCGCGCAGTC CTCCTCGGTG
TGGGAGATCC GCGCCGCGGC ACCGACGATG AGCCGGGCCG GGGTGTTCGC GAGCGGGATG
CGGATCGGGC GCGACCACAT CGCCTCGACG ATCTACACGA TCGTGTTCGC CTACGCCGGC
ACGGCGCTGG CCGTGCTGCT CATCCTCCAG CTCTACGGCC TGCCGTTCGA GGACCTGCTG
ACCACAGAGG ACATCACCGA GGAGATCGTG CGCACCCTGG CCAGCAGCAT CGGGCTGGTG
CTCGCCGTAC CCCTCACCAC CGGGATCGCG GCGCTCGTCA TCCCCGGGCC TCTTGCTTAT
TCGGATAAGG ATGCTTTAGA GTAG
 
Protein sequence
MAAGHAHRAH RGHRHSQAPG PVPGHGPGHG HGGAGAEVEI SRGPRTVLLS ALVLAAAVAI 
AGLVLLWPNG SEVDKITESV PFAAPGVTFP NAEVDRVHPP CAGPGDRSED CGLLDVTVVE
GPGKGDHASV RVAPHVADSG LQRGDEVKLQ RTPGQDGGDT AYAYFGTDRS TPLFVLLLVF
VGLVLVVARW RGLFALVGLA FSGLVLWEFV LPALLTGESG LLVGLTAAAA IMFVVLYTTH
GFSLRTSTAL AGTLVGVGVT AGLGVFATRA TRLTGMTDET AGILSSLVGG LDFHGLFACA
TVIAGLGVLN DVTIAQSSSV WEIRAAAPTM SRAGVFASGM RIGRDHIAST IYTIVFAYAG
TALAVLLILQ LYGLPFEDLL TTEDITEEIV RTLASSIGLV LAVPLTTGIA ALVIPGPLAY
SDKDALE