Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4593 |
Symbol | |
ID | 4598691 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4863925 |
End bp | 4865022 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639779202 |
Product | RNA polymerase factor sigma-70 |
Protein accession | YP_925775 |
Protein GI | 119718810 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02960] RNA polymerase sigma-70 factor, TIGR02960 family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.145917 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGGCGA TCGAGGCGGC ACCGATGACG ACCCATCCGC AGACCGACAC CCCGACCGAG GGCCGGACCG CGGCCGCGCG CAGCGAGCTC GGTGACTTCC CGACGCTGAC CCAGCGCTAC CAGCGCGAGC TGCTCGCGCA CTGCTACCGG ATGTCCGGAT CGGTGCAGGA GGCCGAGGAC CTGGTCCAGG AGACCTTCCT GCGCGCCTGG AAGGCATCGG CCGACTTCCA GGGCCGCTCC TCGGTGCGCA CCTGGCTCTA CCGGATCGCC ACCAACGTCT GCCTGACCAA CCTCGAGGGC CGGCCCCGGC GGCCGCTGCC GGCCGGGCTC GGCACCCCCG ACGCGATGGC CGGCGACGCG CTCGAGGAGA ACCACGAGAT CGCCTGGCTC GAGCCGGTCC CCGACGCGGC CGTCGTCGTC GCCGAGCGCG ACTCGATCCG GCTCGCGTTC GTCGCCGCCC TGCAGCACCT GCCCGCCCGC CAGCGCGCCG TGCTGATCCT GCGCGACGTG CTGCGCTGGT CGGCTGCGGA GGTCGCGGAG GCCCTCGACA CCACCTCGGC CGCGGTCAAC TCCGCGCTCC AGCGCGCGCA CGCGCAGCTC GCCGGCCGCG GCCTCACCGA GGAGACCGTC GAGCCCGACC TGACACCGGC CCAGCAGCAG CTGCTCGAGA GGTACGTCGA CGCGTTCTGG CGCAAGGACG TCGACGCGAT CGTCAGCCTG CTCACGAGCG AGGCCGTCTG GGAGATGCCG CCGTTCACGA ACTGGTTCGT CGGGCCGGAC AACATCGGCG AGCTGATCGA CAAGCACTGC CCCGGGGGCT GGAACGACAT GCCGATGCTG CGTACGTCGG CCAACGGCCA GCCCGCGTTC GGGCTGTACA TGCGGATGGC CGACGGCGGC TTCACGCCGT TCCAGCTGCA GGTGCTCGAG CTGGACGGCT CCCGCGTCGC CCACGTGCAC GCGTTCTTCG ACACCGCGCT GTTCGCGAAG TTCGGCCTGC CCGACCGGCT CGACGACGAC TACCGCCCCG GCGACCACCC GATGAGCCTG GTCCCGACGA GTCCCGCCCC CTCCGCCCCG TCCCCGGCCG GCGAGTGA
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Protein sequence | MTAIEAAPMT THPQTDTPTE GRTAAARSEL GDFPTLTQRY QRELLAHCYR MSGSVQEAED LVQETFLRAW KASADFQGRS SVRTWLYRIA TNVCLTNLEG RPRRPLPAGL GTPDAMAGDA LEENHEIAWL EPVPDAAVVV AERDSIRLAF VAALQHLPAR QRAVLILRDV LRWSAAEVAE ALDTTSAAVN SALQRAHAQL AGRGLTEETV EPDLTPAQQQ LLERYVDAFW RKDVDAIVSL LTSEAVWEMP PFTNWFVGPD NIGELIDKHC PGGWNDMPML RTSANGQPAF GLYMRMADGG FTPFQLQVLE LDGSRVAHVH AFFDTALFAK FGLPDRLDDD YRPGDHPMSL VPTSPAPSAP SPAGE
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