Gene Noca_4475 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4475 
Symbol 
ID4596994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4730905 
End bp4731861 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content72% 
IMG OID639779086 
Product6-phosphogluconate dehydrogenase, NAD-binding 
Protein accessionYP_925659 
Protein GI119718694 
COG category[I] Lipid transport and metabolism 
COG ID[COG2084] 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACACCA CCGTTCCCCA GCCCGGCTCG CTGACGGTCG GCTGGATCGG CGCCGGCAGG 
ATGGGTGCCG CGATGGCGAG CCGTCTGGCG CGGGCCGGCG AGGACGTCAC CGTCTGGAAC
CGGACCCGGG CCAAGGCCGA GGCGCTGAGC GAGGTCGGCT GCGGGGTCGC GGACACGATC
GCCGACCTGC GCGGCCACGA CGTCGTCTTC ACGATGGTCT CGACGCCCGC CGACCTCGAG
CAGGTGCTCG TCGGCGAGGG CGGCCTGCTC GCGGACCCGG CCCGGGTCCC GGCCGTCGTC
GTGGACTGCT CCACGGTCTC CACGGAGTCC TCCGCCGCGA TGCGGGCCGC CTGCAGCGAG
CGCGGGGTGG CCTTCCTCGC CGCACCGGTC AGCGGCAACG GCAAGGTCGT CCGGGCCGGC
GGGCTCAGCC TCGTGGTCTC CGGGCCCGAG GAGACCTACG AGCGGGTCGC CCACCTGCTC
GACCACCTCG GCAAGGGCGC GACGTACGTC GGGGAGGGCG AGCTCGCCCG GCTCGCGAAG
ATCTGCCACA ACGTGATGCT GGGCGTGGTC ACCCAATGCC TGGCGGAGAT CACCGTGCTC
GCCGAGAAGG GCGGGATGTC GCGCGCCGCG TTCCTGGAGT TCCTCAACAA GTCGGTGATG
GGCTCGGTGT TCACCACCTA CAAGACCCCG GCGTTCGTGA ACCTCGACTA CACCCCGACG
TTCACGCCGA TCCTGCTGCG CAAGGACTTC GACCTCGGCC TCGCGGCCGC CCGCCAGCTC
GACGTCCCGA TGCCGGTCGC CGCGGCCACG AACGCCGCCG TCCAGGCCAG CGTGAGCAGC
GGCCGGGTCG AGGAGGACTT CGCGATCCTG CTCGACCTCC AGGCGCACAA CTCCGGCATC
ACCCTCAAGG CCGAGAACGT CCAGGTCGAC GACGGGCTCG GCGGAGAGCT GGGCTGA
 
Protein sequence
MDTTVPQPGS LTVGWIGAGR MGAAMASRLA RAGEDVTVWN RTRAKAEALS EVGCGVADTI 
ADLRGHDVVF TMVSTPADLE QVLVGEGGLL ADPARVPAVV VDCSTVSTES SAAMRAACSE
RGVAFLAAPV SGNGKVVRAG GLSLVVSGPE ETYERVAHLL DHLGKGATYV GEGELARLAK
ICHNVMLGVV TQCLAEITVL AEKGGMSRAA FLEFLNKSVM GSVFTTYKTP AFVNLDYTPT
FTPILLRKDF DLGLAAARQL DVPMPVAAAT NAAVQASVSS GRVEEDFAIL LDLQAHNSGI
TLKAENVQVD DGLGGELG