| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4429 |
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| Symbol | |
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| ID | 4596948 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4682576 |
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| End bp | 4684441 |
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| Gene Length | 1866 bp |
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| Protein Length | 621 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 639779040 |
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| Product | acyl-CoA dehydrogenase domain-containing protein |
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| Protein accession | YP_925613 |
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| Protein GI | 119718648 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00413349 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCACT ACAAGAGCAA CATGCGAGAC ATCGAGTTCA ACCTCTTCGA GGTGCTCGGT
CGCGACGAGA TCCTCGGGAC CGGACCGTTC GCCGAGGTCG ACTCGGAGAC CGCCCGCGCG
ATCCTCACCG AGGTCGACCG CCTCGCGCGC GAGGACCTCG CCGCGTCGTT CGTGGAGGGT
GATCGCAACC CGCCGGTCTT CGACCCGAAG ACCAACACCG CCCCGCTGCC GGAGGCGTTC
GTGAAGAGCT ACCAGGCGTG GATGGACGCC GAGTACTGGC GGCTCACCAC GTTCGCCGAG
CTCGGCGGTA CGCCGGCGCC GTCCAGCATC TGCTGGGCCA TGGGCGAGTT GGTCCTCGGC
GCGAACCCCG CGATCTGGAT GTACGGCGCG GGCCCGATGT TCGCCGGCGT GCTGTGGCGC
AACGGCAACG AGCGGGACCG CCAGATCGCT CAGCTCATCG TCGACAACGG CTGGAACACC
ACCATGGTGC TCACCGAGCC GGACGCCGGC TCCGACGTCG GAGCGGGCCG CACCAAGGCG
ACCCCCAACG ACGACGGCAC CTGGAACATC GAGGGCGTCA AGCGCTTCAT CACCTCCGCC
GAGGGCGTCA GCGACCAGGT CATCCACATG GTGCTGGCCC GCCCGGTCGG CGTCGAGGGC
GCCGGCGGCC CCGGCACCAA GGGCCTGAGC CTGTTCATCG TGCCGAAGTA CCACTTCGAC
CTCGAGACCG GTGAGCTCGG CGAGCGCAAC GGCGCCTACG TCACCAACGT CGAGCACAAG
ATGGGCATCA AGGTCTCCAA CACCTGCGAG CTGACCTTCG GCGACCCGGG CGTGGGCGGC
GGCGAGCCGG CCGTCGGCTA CCTCCTCGGC GAGGTCCACA ACGGCATCGC CCAGATGTTC
CAGGTCATCG AGAACGCCCG GATGATGGTC GGCACCAAGG CGATCGCGAC GCTGTCGACC
GGCTACCTCA ACGCGCTGGA GTTCGCCAAG GAGCGGGTGC AGGGCGCCGA CCTCGCCCAG
TCCGCGGACA AGACCGCGCC GCGGGTGACG ATCACCCACC ACCCCGACGT ACGCCGCTCG
CTGATGACGC AGAAGTCGTT CGCCGAGGCG ATGCGCGCCC TGGTGCTCTA CACCGCGTCC
TGGCAGGACA GGGTGATGAT CGCCGAGCAC AACGGGGAGC GCGACGAGCT CGCCGAGAAG
GTCAACGACC TGCTGCTCCC GATCGTCAAG GGCTACGGCT CGGAGCGCTC GTGGGTGCTG
CTCGGGACCG AGTCGCTGCA GACCCTCGGC GGCTCCGGCT TCCTGCAGGA GTACCCGATC
GAGCAGTACG TCCGCGACGC CAAGATCGAC ACCCTCTACG AGGGCACGAC CGCGATCCAG
GGCCAGGACT TCTTCTTCCG CAAGATCGTC AAGGACCAGG GCAAGGCCCT GGGCCACCTG
GCCGGCGAGA TCCAGAAGTT CATCGACAGC GAGGCCGGCA ACGGCCGCCT GAAGAACGAG
CGCGAGCTGC TGGCCACCGC GCTGGCGGAC GCCAACGCGA TCGTCGGCCA CATGATCAAC
GAGCTGATGT CCTCCCAGGA GGAGGTCCGC AACATCTACA AGGTCGGGCT GAACACCACC
CGCCTGCTGA TGGTGCTCGG CGACGTCGTG TGCGGCTGGC TGCTGCTCCG CCAGGCCGAG
GTGGCGCTCG AGAAGCTCGG GGGCGACGCC GGGTCCCTGG GAGCGAAGGA CCGCGCGTTC
TACGAGGGCA AGATCGCGGC CGCCCAGTTC TTCGCGCAGA ACAACCTGCC GCGGCTGACC
GCCGAGCGGG CCATCGCCGA GTCCATCGAC CTGAGCCTGA TGGACCTCGA CGAGGACGCC
TTCTGA
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| Protein sequence | MSHYKSNMRD IEFNLFEVLG RDEILGTGPF AEVDSETARA ILTEVDRLAR EDLAASFVEG
DRNPPVFDPK TNTAPLPEAF VKSYQAWMDA EYWRLTTFAE LGGTPAPSSI CWAMGELVLG
ANPAIWMYGA GPMFAGVLWR NGNERDRQIA QLIVDNGWNT TMVLTEPDAG SDVGAGRTKA
TPNDDGTWNI EGVKRFITSA EGVSDQVIHM VLARPVGVEG AGGPGTKGLS LFIVPKYHFD
LETGELGERN GAYVTNVEHK MGIKVSNTCE LTFGDPGVGG GEPAVGYLLG EVHNGIAQMF
QVIENARMMV GTKAIATLST GYLNALEFAK ERVQGADLAQ SADKTAPRVT ITHHPDVRRS
LMTQKSFAEA MRALVLYTAS WQDRVMIAEH NGERDELAEK VNDLLLPIVK GYGSERSWVL
LGTESLQTLG GSGFLQEYPI EQYVRDAKID TLYEGTTAIQ GQDFFFRKIV KDQGKALGHL
AGEIQKFIDS EAGNGRLKNE RELLATALAD ANAIVGHMIN ELMSSQEEVR NIYKVGLNTT
RLLMVLGDVV CGWLLLRQAE VALEKLGGDA GSLGAKDRAF YEGKIAAAQF FAQNNLPRLT
AERAIAESID LSLMDLDEDA F
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