Gene Noca_4419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4419 
Symbol 
ID4596938 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4674566 
End bp4675024 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content73% 
IMG OID639779030 
ProductBadM/Rrf2 family transcriptional regulator 
Protein accessionYP_925603 
Protein GI119718638 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.305649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAGTCT CCGCGAAGTC CGACTACGCC CTGCGTGCGC TGATCGAGAT GGCCTCGCGC 
GCGGATGGTC GGGCCGTGAG CGCGGAGGAG CTCGGCCGGC TCCAGGAGAT CCCGCACGGC 
TTCCTCCAGG CGATCCTCGC CGACCTGCGC CGGGCCGGGA TCGTGATGTC CCAGCGCGGC 
CAGTCGGGCG GCTGGCGGAT GGGCCGGTCC GCGGCGGACG TCTCGGTCGC GGACGTGATC 
CGTGCGGTGG ACGGCCCCCT GGTCTCGGTC TACGGGCTGC GCCCCGAGGC GGTCAGCTAC 
AACGAGGCCG CGGACGTGCT CCAGCACGTG TGGATCGCCG CCCGCCACTC CCTGCGCGAC 
GTCTTCGAGC AGGTCTCGAT CCAGCAGCTC GCCGACGGCC GGCTCCCCGA CGCGGTCACC 
ACCCGCACGG CCGACGAGGA CGCCTGGCAG CCCCACTAG
 
Protein sequence
MRVSAKSDYA LRALIEMASR ADGRAVSAEE LGRLQEIPHG FLQAILADLR RAGIVMSQRG 
QSGGWRMGRS AADVSVADVI RAVDGPLVSV YGLRPEAVSY NEAADVLQHV WIAARHSLRD 
VFEQVSIQQL ADGRLPDAVT TRTADEDAWQ PH