Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4405 |
Symbol | |
ID | 4596923 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4661916 |
End bp | 4662872 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 78% |
IMG OID | 639779015 |
Product | hypothetical protein |
Protein accession | YP_925589 |
Protein GI | 119718624 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.00681397 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCCGC AGGCGTACGT CGACGCCCGG TGGCACGCGC TGCTGCGCGC CGCGGTCGAC CTCGGCGTGC CCGAGGAGGA CGCGCCGGCC CTGGTCCGCG GCGTGCTCGC CGCGCAGCGC CGGCGGATCC GCCGCGCGGA GGACCCCGAC CCGCTCGTGC ACGCCGCACT CGCCGGCGCG GTCCGTGGCC CCCGGCCCGC GCGCCGGAGG CCGCCGTGGC GGGTCGTCGC GGGCACCCTC GGCGCGCTCG CCGTGGTCGT CGCCGCGGTC GCCGTCACCC GGCCGGACCG GCCGCCCACC GACCACCTCG ACCCCGACCA GGTGCCGTCG GTGTTCGGCT ACAGCGAGCG GGCCGCCCGC GACCTGCTCG CCGGGCTCGG TCTCGAGGTC AGGGTCCAGC CGATCCGGGC GTGCGAGGTC GCGGGCCGCG CGCTGGGCAG TGACCCGCAG CGCGGCGCGG CGTACCGGCC GGGCGACTCG ATCACGCTCT ACTCGGCGGT GCCCGCGAGC ATCACCTGCC TGACCGACTA CCAACGGCGC GCCACCGCGT GGCAGCTCGT CGACCTGGCC GCCGGTCGCG GCAGCGGACC GGTGTTCGCC GATCGGGTCC TCGTCTACAC CGAGGTGGGC GCCCCGACGG TGCTCACCCG GGACCAGGCC AGCGACCCGG CCGCGTGGGC GCAGACCGGC GTGTTGGACG ACCTGCTGCG GGCGGTCTCC GGCGTCCTGC TGACCGCCGA GCGGCCCCCG ACGTACGCCG TTCCCGCGGT GCGGATCGTG CCCGCCGCCG AAGGTCTCGG CTCGTGCGTG CCGCCGCAGC CGTCTGTCGC GGACAGTGGT GACGCGTTCG CGGTGCTGGT CCTCGCACCG AGCCGTTCGG GCTGTCCGCT GCGGCTGGAG GTCTACCGCG AGGACGGCGC CGTCGACGCG GTGGCCCTCT ACGCCGGCTC GTCCTGA
|
Protein sequence | MDPQAYVDAR WHALLRAAVD LGVPEEDAPA LVRGVLAAQR RRIRRAEDPD PLVHAALAGA VRGPRPARRR PPWRVVAGTL GALAVVVAAV AVTRPDRPPT DHLDPDQVPS VFGYSERAAR DLLAGLGLEV RVQPIRACEV AGRALGSDPQ RGAAYRPGDS ITLYSAVPAS ITCLTDYQRR ATAWQLVDLA AGRGSGPVFA DRVLVYTEVG APTVLTRDQA SDPAAWAQTG VLDDLLRAVS GVLLTAERPP TYAVPAVRIV PAAEGLGSCV PPQPSVADSG DAFAVLVLAP SRSGCPLRLE VYREDGAVDA VALYAGSS
|
| |