| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4349 |
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| Symbol | |
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| ID | 4596867 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 4598438 |
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| End bp | 4599919 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 639778959 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_925533 |
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| Protein GI | 119718568 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTCGTGA CCCGACCCGC GCCCTCGCCG GACCTGACCG CGACGTCGGA GCAGAAGGAG
CCCTGGCCGG CGCTGTTCGC GCTGTGCATC GGCTTCTTCA TGATCCTCGT CGACACCACG
ATCGTGTCGG TCGCGACCCC GGCGATCATC GAGGACCTCC GCGCCGGCGT GAACGACGTC
GTCTGGGTGA CCAGCGCCTA CCTGCTCGCG TACGCCGTCC CCGTGCTGAT CACCGGCCGA
CTCGGTGACC GGTTCGGGCC CAAGCGGCTC TACCTCACCG GCCTGACCGT GTTCACGCTC
GCCTCGCTGT GGTGCGGGCT GACCGGCAGC ATCGAGATGC TGATCGCCGC CCGCGTGCTC
CAGGGCGTCG GCGCCTCGAT GATGACCCCG CAGACGATGG CGATCATCAC CCGGATCTTC
CCGGCCCACC GCCGCGGCTC GGCGATGGCG CTGTGGGGCG CGACCGCGGG CGTCGCGACC
CTGGTCGGCC CGATCCTCGG CGGGGTCCTG GTCGACGGGC TCGGGTGGGA GTGGATCTTC
TTCATCAACG TCCCGGTCGG CCTGATCGGG TTCGTGCTCG CGGTGCGGCT GGTGCCGCGG
CTCGAGACGC ACGCCCACCG CTTCGACTGG GTGGGCGTCG CGCTCAGCGG CGTGGGCATG
TTCCTGCTGG TCTTCGGGAT CCAGGAGGGC CACCAGTACG ACTGGAACGG CGTGATCTGG
ACGTTGATCG GCACCGGCCT GGTCGTGCTC GGGGCCTTCG TGGTCTGGCA GGCCCGCAAC
CGCCGCGAGC CCCTGGTGCC CCTGGGCCTG TTCGCCGACC GCAACTTCAC CCTGGCCAAC
GTCGCCATCT CGGTGATGGG CTTCGCGATC ACCGCGATGG CCATCCCGAT CATGATCTGG
GCGCAGGTGG TGCGCGGGCT CAGCCCGACG CGCTCGGCGC TGCTGCTGGT GCCGATGGCG
GTGATGACGA TCGCGCTGGC CCGCAACGTG GGCAGGCTGA CGGACCGGGT CCACCCCCGG
CAGCTCACCA GCTTCGGGTT CGCCTGCATC GTCGCGTCTC TGGTGTGGCT CTCGGTGCTG
ATGACTCCCG ACACCTCGAT CTGGTGGCTG GTGCCGGCGA TGGTGCTGCT CGGCATCGGC
AACGCCTGCG TCTGGGCGCC CAACAGCGCC ACCGCCACCC GCAACCTGCC GATGCGGCTG
GCCGGCGCCG GCTCCGGGGT CTACAACGCC ACCCGCCAGG TCGGGGCCGT GCTCGGCTCG
GCCGCGATCG CGGTGCTGAT GGACGCGCGG CTGTCCGCCG AGGGGCTCCC GCCGTTCACG
GGCGCGGGCG GTGACGGCGG CCCGGTCACG CTGCCGCCGG CGGTGGCCGA CCACTTCAGC
CAGGCGATGG CGACCTCGAT GCTGCTGCCG GCCGCGGTGC TGGTCCTCGG CTTCGTGGCC
GTGCTGTTCT TCGAGCGACC CCAGCACGCC GGCTTCGAAT GA
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| Protein sequence | MLVTRPAPSP DLTATSEQKE PWPALFALCI GFFMILVDTT IVSVATPAII EDLRAGVNDV
VWVTSAYLLA YAVPVLITGR LGDRFGPKRL YLTGLTVFTL ASLWCGLTGS IEMLIAARVL
QGVGASMMTP QTMAIITRIF PAHRRGSAMA LWGATAGVAT LVGPILGGVL VDGLGWEWIF
FINVPVGLIG FVLAVRLVPR LETHAHRFDW VGVALSGVGM FLLVFGIQEG HQYDWNGVIW
TLIGTGLVVL GAFVVWQARN RREPLVPLGL FADRNFTLAN VAISVMGFAI TAMAIPIMIW
AQVVRGLSPT RSALLLVPMA VMTIALARNV GRLTDRVHPR QLTSFGFACI VASLVWLSVL
MTPDTSIWWL VPAMVLLGIG NACVWAPNSA TATRNLPMRL AGAGSGVYNA TRQVGAVLGS
AAIAVLMDAR LSAEGLPPFT GAGGDGGPVT LPPAVADHFS QAMATSMLLP AAVLVLGFVA
VLFFERPQHA GFE
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