Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4328 |
Symbol | |
ID | 4596846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4577888 |
End bp | 4579336 |
Gene Length | 1449 bp |
Protein Length | 482 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639778938 |
Product | major facilitator transporter |
Protein accession | YP_925512 |
Protein GI | 119718547 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.192705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCCGTG ACACCCTCCC CACCGACCTC CCGCCGAACG CGGGACGGGC GGCCACCGGC GTCGCGATCG TGCTGGTCGC CCAGCTCATG CTCGTCCTGG ACGCGACGGT CGTGAACGTC GCGCTCCCCC GCATCGACGC CGACCTGGGC TTCGGCCCGG CGTCGCTGTC GTGGATCCTC AACGCCTACA CGCTCGCCTT CGGCGGCCTG CTCCTCCTGG GCGGCCGGCT CGGCGACGTC TTCGGTCGGC TCAAGGTCTT CGAGGCCGGG CTCGCCGTGT TCACCCTCGG CTCAGCGCTC GGCGGCCTCG CCCAGACCCC CGGGCAGCTG GTCGCCGCGC GCACCCTCCA GGGCGTCGGC GCCGCGCTCG CCGCGCCGAG CGTCCTGGCC CTGCTCACCA CGAGCGCTCC CGACGAGGCC GCGCGCAACC GCGCGTTCGC GCTCTTCGGC GCGGTCTCCT CCGGCGGCGC CTCGATCGGC CTGCTGCTGG GCGGCCTGCT CACCGACGTC GGGTCGTGGC GCTGGACGCT GTTCATCAAC GTCCCGCTCG GGGTCGCCGT GCTCCTGCTG GCGCCGCGGT ACGTCGACGG GACCCGCCGC CGGCCCGGCC GCTTCGACCT CGTCGGCGCG TTCGCCGCGA CCTTCGGCGC GGTGTCCCTC GTCTGGGCGC TGATCGGCAC CCCCGAGCAC GGCTGGGCCG CGCCGCGCAC CCTCGGCGGC TTCGCGATCG GCGTCGCACT CCTCGCCCTG CTGGCCCGCA CCGAGGTGCG GCACCCGCAC CCGATGGTGC AGCCCGCCCT GCTGCGCAGC CGGCCCCGGG TCGCCGCGCT CGGCGTGATG GCGCTGATGA TCGGCGCGAA CCTGTCGATG TTCTTCCTGG TCGTGCAGTA CGTCCAGGGC GTGCTCGGCT TCGGCCCGCT GATGGCGGGC GTCGCGTTCC TGCCGTTCAG CCTCGGCATC TTCGCGATCT CGCGCGTCAC GCCCGAGCTG CTGGCCCGGT TCGGTGCCCG GGCGATGGTC CTGGTCGGCA GCGCCGCGCT GGCCGCCGGC TACACGTGGC TGAGCACGAT CGGCACCACC GACTCCTACC CCGCGGCGGT GTTCGGGCCG ATGGTGATCG CCGGTCTCGC CACCGGGCTG GTCTTCATGC CGGTGACCGC GACGGTGCTC GGCGGGGTCG AGCCCGAGCA CGCCGGGTCC GCCTCCGGCC TGCTGCAGAC CACGCAGCAG CTCGGCAGCG CCGTCGGCGT GGCCGCGATC GTGTCGGTCT ACGCCGCGGG CGCCGTGCCC GGCGAGCTGG TCCCGGGCCT GCAGCCGGCG TTCCTCACCT CGGCGGCGTT CGCCGCGCTG GCGACGGTCG TCGGCCTGGT CGGGCTGCCC GCCCGGGCGC CGCGGCCGGT CGAGATCGCC GACGAGGAGG TCGAGGCGGT GGCCGCCGAG GCGGCTTGA
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Protein sequence | MSRDTLPTDL PPNAGRAATG VAIVLVAQLM LVLDATVVNV ALPRIDADLG FGPASLSWIL NAYTLAFGGL LLLGGRLGDV FGRLKVFEAG LAVFTLGSAL GGLAQTPGQL VAARTLQGVG AALAAPSVLA LLTTSAPDEA ARNRAFALFG AVSSGGASIG LLLGGLLTDV GSWRWTLFIN VPLGVAVLLL APRYVDGTRR RPGRFDLVGA FAATFGAVSL VWALIGTPEH GWAAPRTLGG FAIGVALLAL LARTEVRHPH PMVQPALLRS RPRVAALGVM ALMIGANLSM FFLVVQYVQG VLGFGPLMAG VAFLPFSLGI FAISRVTPEL LARFGARAMV LVGSAALAAG YTWLSTIGTT DSYPAAVFGP MVIAGLATGL VFMPVTATVL GGVEPEHAGS ASGLLQTTQQ LGSAVGVAAI VSVYAAGAVP GELVPGLQPA FLTSAAFAAL ATVVGLVGLP ARAPRPVEIA DEEVEAVAAE AA
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