| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_4297 |
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| Symbol | |
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| ID | 4596815 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 4539863 |
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| End bp | 4540603 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639778907 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_925481 |
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| Protein GI | 119718516 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.408574 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGC TCGACTCCAA GATCGCGGTC GTCACCGGCG CCGGACAGGG CATCGGCAAG
GCGATCGCCA CGAAGCTGGC GGCTGAGGGC GCCACCGTGG TGGTGACCGA CGTCGACCAC
CAGGCCGCGA AGGAGACCGC CGCGGCACTC GACCACGGTG CGATCGGCCT GCACGCCGAC
GTCACCGATC GCACCTCCGT CGACGCGATG GTCGACGAGG TGGTCGCGAC CTTCGGGCGG
ATCGACGTAC TCGTCAACAA CGCCGGCTGG GACAAGGGCG AGGCGTTCGT CGACTCCGAG
CCGGAGACGT GGGACCGGAT CATCGGCATC AACCTCTACG GCGTGCTCAA CACCTCCAAG
AAGGTGCTGC CGATCATGGC CGCGCAGGGC TCCGGGAGCG TGGTCAACAT CGGGTCGGAC
GCCGGCCGGG TGGGCTCGTC GGGCGAGGCC GTCTACTCGG CGGCCAAGGG CGGCGTCATC
GCGTTCAGCA AGGCCACGGC CCGGGAGATG GCCCGCAGCC AGGTCAACGT CAACTGCGTC
TGCCCGGGAC CCACCGACAC CGCGCTGTTC GCCTCCATGG GCGGGGACAA GCTCCGCGAG
GCGCTCGTCA AGGCCATCCC GTTCCGCCGG CTCGGGCAGC CCGAGGACCT CGCGAACGTG
GTCGCCTTCC TGGCCTCCGA CGAGGCCGGC TTCGTCACCG GACAGACCGT CAGCGTCAGC
GGCGGCCTCA CGATGTCTTG A
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| Protein sequence | MGKLDSKIAV VTGAGQGIGK AIATKLAAEG ATVVVTDVDH QAAKETAAAL DHGAIGLHAD
VTDRTSVDAM VDEVVATFGR IDVLVNNAGW DKGEAFVDSE PETWDRIIGI NLYGVLNTSK
KVLPIMAAQG SGSVVNIGSD AGRVGSSGEA VYSAAKGGVI AFSKATAREM ARSQVNVNCV
CPGPTDTALF ASMGGDKLRE ALVKAIPFRR LGQPEDLANV VAFLASDEAG FVTGQTVSVS
GGLTMS
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