Gene Noca_4215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4215 
Symbol 
ID4596729 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4456134 
End bp4457357 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content57% 
IMG OID639778821 
Productglycosyl transferase, group 1 
Protein accessionYP_925399 
Protein GI119718434 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.728114 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGGCTGG TCTACCTGAC GTCTCAGTAT CCGACGGGCG GGGGTGAGAC GTTCCTCAGT 
GCTGAGTTGG ACAGCTTGCA GAGTGCAGGA TTTGAAGTCG CTGTGGCACC GTGCCGACCG
GGCGGTTCAC ATTCGCGACG GTCCGGTGAA CGCAGTCTGC TAACGGCCCA CATGCTTTCC
CCGCGACTCC TCATCGCCTC CTTGTGCGCA GTACTGCGTG ATCCCCGGAT CATCGTATTT
GCGGTGCTGC TCCTCGTCTC CGACATCCGC AACGCCCACA AGAACATCCT CGTACTTCCC
AAAGGCATAG TAGTTGGAGC GGAGTGTATC CGTATGCGCG TGCATCACAT TCATGCCCAT
TGGCTGTCCA CGCCGGCTAC GGTCGCGTTG CTGGCATCGT ACGTTTCGGG TGTTCCATTC
AGTGTGACTG CCCACAGAGG GGATATCGTC GCCAAGAATC TCTTGACACT CAAGGCGCAT
CGGGCTTCGT TCATTAGGTT TATCTCCAAC AGCGGATTAG ATCTCTTCCG CTCAGTTACG
CCCGCGTCAC TCCAGACCCG ATTCGTGGTC GTACACATGG GGGTTGAGGT TGCCGAAGAC
TTCACTCATC CCCGCGCCTT GAGTGCAGCT GACGACTTCC GGATCGCTTG TCCGGCGAAC
CTGACGGCCG TTAAGGGACA TGATTACTTG TTTGGAGCGG TTGCCGTCCT ACGCCGGATC
GGCCTCCCGG TGCGGCTCGA CATCGTCGGC ACAGGCGAAC GTGAACGAGA ACTTCGCAGG
CTCTGCTCAT CATTGGATAT TTCTGACATT GTTCGATTCT GTGGATACCA AGCCCATAAC
GACCTCCTCG CGACCCTTGC GTCCGGCGGG TACGACGCGG TGGTGCTTCC AAGCGTCGAC
CTTGGAAACG GTCTGCATGA AGGCATTCCG GTAACATTGA TGGAGGCCAT GGCGCGGGGG
GTTCCCGTGA TATCCACCGC GACAGGTGGG ATTCCCGAAC TTCTGCAGGG CGGTTACGCG
CGAATGCTGG TCGAGCCATG CAATGTGCAA GCGCTTGCCG ATTCTATCCG AGTCTTATTC
CAGTCGGACG ACTTGCGTCA AGAGTTGTCA ACACTTGGAC GCGAGATCGT GAAGCGAGAA
TTCAACGCAC AACTAAACGG CGTGGAGCTG GCGCGCTGGA TTTATAACAC GACAGCTTCT
GATCTCGGCC CGGCTTCTAT TTAA
 
Protein sequence
MRLVYLTSQY PTGGGETFLS AELDSLQSAG FEVAVAPCRP GGSHSRRSGE RSLLTAHMLS 
PRLLIASLCA VLRDPRIIVF AVLLLVSDIR NAHKNILVLP KGIVVGAECI RMRVHHIHAH
WLSTPATVAL LASYVSGVPF SVTAHRGDIV AKNLLTLKAH RASFIRFISN SGLDLFRSVT
PASLQTRFVV VHMGVEVAED FTHPRALSAA DDFRIACPAN LTAVKGHDYL FGAVAVLRRI
GLPVRLDIVG TGERERELRR LCSSLDISDI VRFCGYQAHN DLLATLASGG YDAVVLPSVD
LGNGLHEGIP VTLMEAMARG VPVISTATGG IPELLQGGYA RMLVEPCNVQ ALADSIRVLF
QSDDLRQELS TLGREIVKRE FNAQLNGVEL ARWIYNTTAS DLGPASI