Gene Noca_4144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4144 
Symbol 
ID4596658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4378177 
End bp4378641 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID639778750 
Productcytosine deaminase 
Protein accessionYP_925328 
Protein GI119718363 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACG AAGAGATGCT CGTCCTGGCC GTCGAGGAGG CCCGCCGCGG ACTCGCGGAG 
GGCGGGATCC CGATCGGCGC CGTCCTCATC CACGACGGCG AGGTCTTGGG TGGCGGCCAC 
AACCGTCGGG TCCAGCTCGG CAGCGCGATC CGGCATGGTG AGACCGACTG CCTGGAGAAC 
ATCGGCCGAC TGCCGGCGAG CGTCTACGCG CGCTCGACGA TGGTGACGAC CCTGTCGCCC 
TGCGACATGT GCACCGGCGC GATCTTGCTC TACGGCATCC CGCGCGTGGT CGTCGGCGAG 
AACCGCAACT TCCTCGGCGG TGAGGAGCTG CTGGCCTCCC GAGGGGTGGA GGTGGTCGTT 
CTGGACGACC TGGGCTGTGT CGAGATGATG GCCACCTTCA TCGCCGAGCA CCCGACGCTG 
TGGAACGAGG ACATCGGGGT CGAGGACGAC TCGTCGGTCT CGTAG
 
Protein sequence
MTDEEMLVLA VEEARRGLAE GGIPIGAVLI HDGEVLGGGH NRRVQLGSAI RHGETDCLEN 
IGRLPASVYA RSTMVTTLSP CDMCTGAILL YGIPRVVVGE NRNFLGGEEL LASRGVEVVV 
LDDLGCVEMM ATFIAEHPTL WNEDIGVEDD SSVS