Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_4126 |
Symbol | |
ID | 4596640 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4357139 |
End bp | 4358284 |
Gene Length | 1146 bp |
Protein Length | 381 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 639778732 |
Product | L-carnitine dehydratase/bile acid-inducible protein F |
Protein accession | YP_925310 |
Protein GI | 119718345 |
COG category | [C] Energy production and conversion |
COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCCTCC CGGGACCCGG CGCCCTCGCG GGAGTCCGGG TCGTCGACCT CTCCCGCAAC GCGCCGGGAC CGTACGCGTC GATGCTGCTC GCCCGCCTCG GCGCCGAGGT CGTCACCGTC GCGGGCGGGC GGACCGGCGA GGCGTTGCCC GAGCTCGCGA TGGGCAAGCG CCAGATCACC CTCGACCTCC GCAGCGGCGA CGGAGTCCGC GCCCTGGAGC GCCTCGTGGC CGAGGCCGAC GTGCTGCTCG AGTCCTTCCG CCCAGGCGTG CTGGACCGGC TCGGCGTGGG CTACGAGCAC CTCGCCGCGC TCAACCCGCG GCTCGTGTAC TGCGCGCTGA CCGGCTACGG CCAGCAGGGC CGGTTGCGGG CCGCGGCCGG GCACGACATC AACTACCTGG CGGTCACCGG CGTCCTCGGC TGCCTGGGCC CCGCCGGTGA GCCGGCCGTC CCCCCGATCA ACCTGGTGGC GGACATGGGC GGCGGCGGAC TGTGGGCGGC GTTCGGCGTC CTCGCCGCCC TGCACGAGCG GTCGCGGACC GGCCGGGGCC GGTTCGTCGA CGCCTCGATG GTCGACGGAG TGCTCTCGAT GATGGGCACC TGGATGACCG CCTGGGGCAC GAGCATCATG CCGGCGCGCG GCGAGGGCCT GATGAGCGGG AAGGCGCCGT TCTACCGCTG CTACCGCTGC GGAGACGGCG AATGGGTGGC GGTCGGTGCG ATCGAGCCGC GGTTCTTCCG CGAGCTCTGG AGGGTGGTCG GTCTCCCCGG TGAACCGCCG GACCACCTCG ACCCGGCCGG CTGGCCCGAC CTCGGTGCGC GGCTGGAAGC GGTCTTCGCC ACCCGCGACC GCGACGAGTG GGCCGACCTC GCCTCGGACG AGTGCTGCCT GACCCCCGTC CTCGCCCCCG ACGAGGTGCG TCGTCACCCG CACCACCGCG ACCGGCTGCC GCAGGGCGCG GACGTGGCCC CGGCGGAGCT CTTCCCCCGG GTCGACTGGC TGAGCGCCAA CCCGTGGGTC GCCGACGGGG ACGAGACCGA GGCGATCCTG CGCAACGCCG GGCTGGACGA GGACACCCTC GCCCGGGTGG TGAGCGCCCT CGCGTCGGTG CCCCGCCCTG AGCTGGCCTG GCCGCCCGCC CGCTGA
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Protein sequence | MTLPGPGALA GVRVVDLSRN APGPYASMLL ARLGAEVVTV AGGRTGEALP ELAMGKRQIT LDLRSGDGVR ALERLVAEAD VLLESFRPGV LDRLGVGYEH LAALNPRLVY CALTGYGQQG RLRAAAGHDI NYLAVTGVLG CLGPAGEPAV PPINLVADMG GGGLWAAFGV LAALHERSRT GRGRFVDASM VDGVLSMMGT WMTAWGTSIM PARGEGLMSG KAPFYRCYRC GDGEWVAVGA IEPRFFRELW RVVGLPGEPP DHLDPAGWPD LGARLEAVFA TRDRDEWADL ASDECCLTPV LAPDEVRRHP HHRDRLPQGA DVAPAELFPR VDWLSANPWV ADGDETEAIL RNAGLDEDTL ARVVSALASV PRPELAWPPA R
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