Gene Noca_4126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_4126 
Symbol 
ID4596640 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4357139 
End bp4358284 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content75% 
IMG OID639778732 
ProductL-carnitine dehydratase/bile acid-inducible protein F 
Protein accessionYP_925310 
Protein GI119718345 
COG category[C] Energy production and conversion 
COG ID[COG1804] Predicted acyl-CoA transferases/carnitine dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCCTCC CGGGACCCGG CGCCCTCGCG GGAGTCCGGG TCGTCGACCT CTCCCGCAAC 
GCGCCGGGAC CGTACGCGTC GATGCTGCTC GCCCGCCTCG GCGCCGAGGT CGTCACCGTC
GCGGGCGGGC GGACCGGCGA GGCGTTGCCC GAGCTCGCGA TGGGCAAGCG CCAGATCACC
CTCGACCTCC GCAGCGGCGA CGGAGTCCGC GCCCTGGAGC GCCTCGTGGC CGAGGCCGAC
GTGCTGCTCG AGTCCTTCCG CCCAGGCGTG CTGGACCGGC TCGGCGTGGG CTACGAGCAC
CTCGCCGCGC TCAACCCGCG GCTCGTGTAC TGCGCGCTGA CCGGCTACGG CCAGCAGGGC
CGGTTGCGGG CCGCGGCCGG GCACGACATC AACTACCTGG CGGTCACCGG CGTCCTCGGC
TGCCTGGGCC CCGCCGGTGA GCCGGCCGTC CCCCCGATCA ACCTGGTGGC GGACATGGGC
GGCGGCGGAC TGTGGGCGGC GTTCGGCGTC CTCGCCGCCC TGCACGAGCG GTCGCGGACC
GGCCGGGGCC GGTTCGTCGA CGCCTCGATG GTCGACGGAG TGCTCTCGAT GATGGGCACC
TGGATGACCG CCTGGGGCAC GAGCATCATG CCGGCGCGCG GCGAGGGCCT GATGAGCGGG
AAGGCGCCGT TCTACCGCTG CTACCGCTGC GGAGACGGCG AATGGGTGGC GGTCGGTGCG
ATCGAGCCGC GGTTCTTCCG CGAGCTCTGG AGGGTGGTCG GTCTCCCCGG TGAACCGCCG
GACCACCTCG ACCCGGCCGG CTGGCCCGAC CTCGGTGCGC GGCTGGAAGC GGTCTTCGCC
ACCCGCGACC GCGACGAGTG GGCCGACCTC GCCTCGGACG AGTGCTGCCT GACCCCCGTC
CTCGCCCCCG ACGAGGTGCG TCGTCACCCG CACCACCGCG ACCGGCTGCC GCAGGGCGCG
GACGTGGCCC CGGCGGAGCT CTTCCCCCGG GTCGACTGGC TGAGCGCCAA CCCGTGGGTC
GCCGACGGGG ACGAGACCGA GGCGATCCTG CGCAACGCCG GGCTGGACGA GGACACCCTC
GCCCGGGTGG TGAGCGCCCT CGCGTCGGTG CCCCGCCCTG AGCTGGCCTG GCCGCCCGCC
CGCTGA
 
Protein sequence
MTLPGPGALA GVRVVDLSRN APGPYASMLL ARLGAEVVTV AGGRTGEALP ELAMGKRQIT 
LDLRSGDGVR ALERLVAEAD VLLESFRPGV LDRLGVGYEH LAALNPRLVY CALTGYGQQG
RLRAAAGHDI NYLAVTGVLG CLGPAGEPAV PPINLVADMG GGGLWAAFGV LAALHERSRT
GRGRFVDASM VDGVLSMMGT WMTAWGTSIM PARGEGLMSG KAPFYRCYRC GDGEWVAVGA
IEPRFFRELW RVVGLPGEPP DHLDPAGWPD LGARLEAVFA TRDRDEWADL ASDECCLTPV
LAPDEVRRHP HHRDRLPQGA DVAPAELFPR VDWLSANPWV ADGDETEAIL RNAGLDEDTL
ARVVSALASV PRPELAWPPA R