Gene Noca_3923 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3923 
Symbol 
ID4598058 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp4129750 
End bp4131861 
Gene Length2112 bp 
Protein Length703 aa 
Translation table11 
GC content66% 
IMG OID639778529 
Producttranslation elongation factor 2 (EF-2/EF-G) 
Protein accessionYP_925108 
Protein GI119718143 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00484] translation elongation factor EF-G 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCTGTCG ACATCACCAC CGACCTCAAC AAGGTCCGCA ACATCGGCAT CATGGCGCAC 
ATCGACGCCG GCAAGACGAC GACGACCGAG CGCATCCTGT TCTACACCGG CATCACCTAC
AAGATCGGTG AGGTCCACGA GGGCGCGGCC ACGATGGACT GGATGGAGCA GGAGCAGGAG
CGCGGCATCA CCATCACGTC CGCGGCGACG ACCTGCTGGT GGAAGGACCA CCAGATCAAC
ATCATCGACA CCCCGGGCCA CGTGGACTTC ACCGCCGAGG TCGAGCGCTC GCTGCGCGTC
CTCGACGGCG CGGTCGCCGT CTTCGATGGC GTGGCCGGCG TCGAGCCGCA GACGATGACC
GTGTGGCGCC AGGCGAACAA GTACGCCGTC CCGCGGATGT GCTTCGTCAA CAAGCTCGAC
CGCACCGGCG CGGACTTCTT CCGCTGCGTC GACATGATGG TCGAGCGCCT CAACTCCACC
CCGCTCGTGC TCCAGCTCCC GATCGGCGCC GAGTCGGACT TCCTCGGTGT GGTCGACCTG
GTCGGGATGC GCGCGCTCAC CTGGCGCGGC GAGACCAAGA TGGGCGAGGA CTACGAGGTC
GAGGAGATCC CGGCCGAGCT GGCCGAGCAG GCCGCGGAGT ACCGCGAGAA GCTGCTCGAG
ACCCTGTCCG AGGCCGACGA CGACGTCATG GAGAAGTACC TCGAGGGCGA GGACTTCACC
GTCGAGGAGC TCGAGGCCGC GATCCGTCGC GCCACCCTGG CCGACAAGGT CAACCCGGTC
CTGTGCGGCA CCGCGTTCAA GAACAAGGGC GTGCAGCCCC TGCTCGACGC GGTCGTGAAG
TTCCTGCCGT CCCCGCTGGA CATCGGCGAG ATCATCGGTC ACTCCGTCAA GGACGAGAAC
GAGAAGGTCT CCCGCAAGCC CGCCGACAGC GAGCCGTTCT CCGGCCTGGC CTACAAGATC
GCCTCGGACC CGCACCTCGG CAAGCTGATC TACATCCGGG TCTACTCCGG CAAGCTCGAG
GCCGGCTCGA CCGTGGTCAA CTCGGTCAAC GGCCGCAAGG AGCGGATCGG CAAGGTCTAC
CAGATGCACG CCAACAAGCG TGAGGAGATC GCGTCGGTCG GTGCCGGCCA GATCGTGGCC
GTCATGGGTC TCAAGGACAC CAAGACGGGG CACACCCTGT CCGACCCACA GCACCAGGTC
GTCCTCGAGT CGATGACGTT CCCCGCCCCG GTGATCGAGG TCGCGATCGA GCCCAAGACC
AAGAGCGACC AGGAGAAGCT CGGTACGGCG ATCCAGCGCC TCTCCGACGA GGACCCGACG
TTCACCGTCA AGTCCGACGA GGAGACCGGC CAGACCATCA TCGCCGGCAT GGGCGAGCTG
CACCTGGAGA TCCTGGTCGA CCGGATGCGC CGCGAGTTCC GCGTCGAGGC CACCGTCGGC
AAGCCGCAGG TCGCCTACCG CGAGACCATC CGCCGCAAGG TCGAGAACCA CAGCTACACC
CACAAGAAGC AGACCGGTGG TTCGGGCCAG TTCGCGAAGG TGATCATCTC GCTCGAGCCG
AGCATCGACC CCGAGACCAA CACGGGCGCG GGCTACGAGT TCGTGAACAA CGTGTCCGGT
GGTCGCGTGC CGCGCGAGTA CATCCCCTCG GTCGACCAGG GCGCCCAGGA GGCGATGGAG
TTCGGCGTGC TCGCCGGCTA CCCGATGGTC GACGTGAAGG TCACCCTCGA GGACGGCGCC
TACCACGACG TCGACTCCTC CGAGCTCGCG TTCAAGATCG CCGGCAACCA GGCCTTCAAG
GAGGCCGCGC GGCAGGCCAA GCCCGTGCTG CTCGAGCCGA TGTTCGCGGT GGAGGTGACC
ACGCCGGAGA CCTTCCTCGG CACGGTCATC GGCGACATCA ACAGCCGTCG CGGCCACATC
CAGGCCCAGG AGGAGCGTCA CGGTGACATG GTCATCAGTG CCCTCGTGCC GCTCTCAGAG
ATGTTCGGGT ACGTTGGCGA CCTGAGGTCG AAGACCTCCG GCCAGGCTTC GTACTCGATG
GAGTTCGACT CGTACGCCGA GGTCCCCCAG GGCATCGCCG ACGAGATCAT CAAGAAGGTG
CGTGGCGAGT AG
 
Protein sequence
MAVDITTDLN KVRNIGIMAH IDAGKTTTTE RILFYTGITY KIGEVHEGAA TMDWMEQEQE 
RGITITSAAT TCWWKDHQIN IIDTPGHVDF TAEVERSLRV LDGAVAVFDG VAGVEPQTMT
VWRQANKYAV PRMCFVNKLD RTGADFFRCV DMMVERLNST PLVLQLPIGA ESDFLGVVDL
VGMRALTWRG ETKMGEDYEV EEIPAELAEQ AAEYREKLLE TLSEADDDVM EKYLEGEDFT
VEELEAAIRR ATLADKVNPV LCGTAFKNKG VQPLLDAVVK FLPSPLDIGE IIGHSVKDEN
EKVSRKPADS EPFSGLAYKI ASDPHLGKLI YIRVYSGKLE AGSTVVNSVN GRKERIGKVY
QMHANKREEI ASVGAGQIVA VMGLKDTKTG HTLSDPQHQV VLESMTFPAP VIEVAIEPKT
KSDQEKLGTA IQRLSDEDPT FTVKSDEETG QTIIAGMGEL HLEILVDRMR REFRVEATVG
KPQVAYRETI RRKVENHSYT HKKQTGGSGQ FAKVIISLEP SIDPETNTGA GYEFVNNVSG
GRVPREYIPS VDQGAQEAME FGVLAGYPMV DVKVTLEDGA YHDVDSSELA FKIAGNQAFK
EAARQAKPVL LEPMFAVEVT TPETFLGTVI GDINSRRGHI QAQEERHGDM VISALVPLSE
MFGYVGDLRS KTSGQASYSM EFDSYAEVPQ GIADEIIKKV RGE