Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3915 |
Symbol | |
ID | 4598050 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 4121034 |
End bp | 4121996 |
Gene Length | 963 bp |
Protein Length | 320 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639778521 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_925100 |
Protein GI | 119718135 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1175] ABC-type sugar transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.604651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACAG GTGAGAAGTT CATCCAGATG GTGATCGCGA TCGCGGTGTT CTTCGCCGTG GTCGCGGTCA TCTTGCTGCT CACCCAGCGG CTCCGGTCCC GCCGGGGCGA GCTGGTGCAG TCGGCGGCGT TCGTGCTGCC GGCGATCGCC CTGATCGGCG TCGGCCTGCT GTACCCCGCG GTCACGACGA TCTACCAGTC GTTCCTGGAC CGCACCGGCG ACGCCGGGGT CGGGTTCGAC AACTACAAGA CCATCTTCAC CGACGCCGAC CAGCTCATCG TGCTGCGCAA CACCGCGGCC TGGGTGATCC TGGTGCCGAT CCTGTCCACG GTCATCGGCC TCGTGTACGC CGTGCTCGTG GACCGGTCCC GCTTCGAGAA GGTCGCGAAG GCGCTGATCT TCCTGCCGAT GGCGATCTCG CTGGTCGGCG CCTCGATCAT CTGGCGGTTC GTCTACGACT ACCACGACAA GAGCCAGACC CAGATCGGCA TCGCGAACGC CGTCCTCAAG GGGCTGGGCT TCGACACCTA CAAGTTCATC CTCAACGATC CCTGGAACAC GGTCTTCCTG ATCGTCGTGA TGATCTGGGT GCAGGCCGGC TTCGCGATGG TGATCCTCTC GGCCTCGATC AAGGCCATCC CCGACGACAT CGTCGAGGCC GCCCGGCTCG ACGGTGTGGG CGGGTTCCGG ATGTTCCGCT ACATCACCGT GCCGAGCATC CGCCCGTCCC TGATCGTCGT GCTCACCACG ATCAGCATCA CCACGCTGAA GGCCTTCGAC ATCGTGCGGA CGATGACCGG CGGCAACTTC GACACCAGCG TGCTGGCCTA CCAGTTCTAC CGGGAGTACT TCGTCTCCGC GAACCAGGGC CTGGCCACGG CGATCGCGAC GCTGATCTTC GTCCTGGTCA TGCCGATCGT CATCTACAAC GTCCGTCAGA TGCGCAAGCT GGAGGCACGA TGA
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Protein sequence | MSTGEKFIQM VIAIAVFFAV VAVILLLTQR LRSRRGELVQ SAAFVLPAIA LIGVGLLYPA VTTIYQSFLD RTGDAGVGFD NYKTIFTDAD QLIVLRNTAA WVILVPILST VIGLVYAVLV DRSRFEKVAK ALIFLPMAIS LVGASIIWRF VYDYHDKSQT QIGIANAVLK GLGFDTYKFI LNDPWNTVFL IVVMIWVQAG FAMVILSASI KAIPDDIVEA ARLDGVGGFR MFRYITVPSI RPSLIVVLTT ISITTLKAFD IVRTMTGGNF DTSVLAYQFY REYFVSANQG LATAIATLIF VLVMPIVIYN VRQMRKLEAR
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