Gene Noca_3862 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3862 
Symbol 
ID4597997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand- 
Start bp4081595 
End bp4082203 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content73% 
IMG OID639778468 
Productregulatory protein, TetR 
Protein accessionYP_925047 
Protein GI119718082 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.07928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGACA TGAGCGCGTC CAGCCCCGTT CCCGATGCCC GGACCCGGCT CGCGGCCGCC 
GCCGTGGACG CGTTCGCCGT GCGCGGCTTC CACGGGACGA CCACGCGCGA CATCTCGACC 
AGCGCCGGGA TGAGCCCGGC CGCGCTCTAC GTCCACCACC GCTCCAAGGA GGAGCTGCTC 
TTCGAGCTCG CGCGCGTGGG GCACCTGCGA GTGCTGGAGC TGGTGCGCGC GTCGGTGGCG 
CCGCTGTCCG ACCCCGTGGC CCAGCTCGGT CAGCTGGTCG AGGACTTCGT GCGCGACCAC 
GCCGAGGCGC ACACCGGGGC GCGGGTGATC AACTACGAGC TCGCCGCGCT CAGTCCCGAG 
CACCATGCCG AGGTCCTCGC GATCCGCCAC GAGATCGACC TGGTGCTGCG TGACGTGCTC 
GACCGTGGCG TCGCCGCTGG CGTCTTCACC ACGCCCGACC CCCGGATGAC GGCCCTCGCC 
ATCTTGTCCC TGGGCATCGA CGTCGCCCGC TGGTACCGCG ACGAGGGGCG CTGGGCCCCC 
GACGAGGTCG CCGCCCACTA CCGCCTGCTC GCCCTCCGGA TGGTCGGCGC CGAGTCGCCG 
CGTCCCTGA
 
Protein sequence
MLDMSASSPV PDARTRLAAA AVDAFAVRGF HGTTTRDIST SAGMSPAALY VHHRSKEELL 
FELARVGHLR VLELVRASVA PLSDPVAQLG QLVEDFVRDH AEAHTGARVI NYELAALSPE 
HHAEVLAIRH EIDLVLRDVL DRGVAAGVFT TPDPRMTALA ILSLGIDVAR WYRDEGRWAP 
DEVAAHYRLL ALRMVGAESP RP