Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3862 |
Symbol | |
ID | 4597997 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 4081595 |
End bp | 4082203 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 639778468 |
Product | regulatory protein, TetR |
Protein accession | YP_925047 |
Protein GI | 119718082 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.07928 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGACA TGAGCGCGTC CAGCCCCGTT CCCGATGCCC GGACCCGGCT CGCGGCCGCC GCCGTGGACG CGTTCGCCGT GCGCGGCTTC CACGGGACGA CCACGCGCGA CATCTCGACC AGCGCCGGGA TGAGCCCGGC CGCGCTCTAC GTCCACCACC GCTCCAAGGA GGAGCTGCTC TTCGAGCTCG CGCGCGTGGG GCACCTGCGA GTGCTGGAGC TGGTGCGCGC GTCGGTGGCG CCGCTGTCCG ACCCCGTGGC CCAGCTCGGT CAGCTGGTCG AGGACTTCGT GCGCGACCAC GCCGAGGCGC ACACCGGGGC GCGGGTGATC AACTACGAGC TCGCCGCGCT CAGTCCCGAG CACCATGCCG AGGTCCTCGC GATCCGCCAC GAGATCGACC TGGTGCTGCG TGACGTGCTC GACCGTGGCG TCGCCGCTGG CGTCTTCACC ACGCCCGACC CCCGGATGAC GGCCCTCGCC ATCTTGTCCC TGGGCATCGA CGTCGCCCGC TGGTACCGCG ACGAGGGGCG CTGGGCCCCC GACGAGGTCG CCGCCCACTA CCGCCTGCTC GCCCTCCGGA TGGTCGGCGC CGAGTCGCCG CGTCCCTGA
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Protein sequence | MLDMSASSPV PDARTRLAAA AVDAFAVRGF HGTTTRDIST SAGMSPAALY VHHRSKEELL FELARVGHLR VLELVRASVA PLSDPVAQLG QLVEDFVRDH AEAHTGARVI NYELAALSPE HHAEVLAIRH EIDLVLRDVL DRGVAAGVFT TPDPRMTALA ILSLGIDVAR WYRDEGRWAP DEVAAHYRLL ALRMVGAESP RP
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