| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3837 |
|---|
| Symbol | |
|---|
| ID | 4595902 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardioides sp. JS614 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008699 |
|---|
| Strand | - |
|---|
| Start bp | 4056426 |
|---|
| End bp | 4057907 |
|---|
| Gene Length | 1482 bp |
|---|
| Protein Length | 493 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 639778443 |
|---|
| Product | GTP-binding protein, HSR1-related |
|---|
| Protein accession | YP_925022 |
|---|
| Protein GI | 119718057 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2262] GTPases |
|---|
| TIGRFAM ID | [TIGR03156] GTP-binding protein HflX |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGAACG CACCTGACCT CAACTCCTTC AGCCTCGACG ACGAGCTCGC GGCCACCGAG
GACTGGGAGG ACGACGACTT CCGGTCCGGC TATGTCGACG AGCCCGACCC GGAGGAGCCC
ACGACCGGCG ACCTCGACCT CGCGGAGCGG CACGAGCTGC GCCGCGTGGC GGGGCTGCGC
ACCGAGCTCG AGGACATCAC CGAGGTCGAG TACCGCCAGC TCCGGCTGGA GCGGGTGGTG
CTCGTCGGGG TCTGGACCGA GGGGTCCGTC GAGGACGCGG AGAACTCCAT GGCCGAGCTC
GCGCTGCTCG CCGAGACCGC CGGCTCAGAG GTGCTCGACG CGATCTACCA GCGCCGCCAG
AAGCCCGACC CCGCCACCTA CATCGGCCGG GGCAAGGTCG ACGGCCTGCG CGAGATCGTG
CAGGCCACCG GCGCCGACAC CGTCATCTGC GACGGCGAGC TGGCGCCCAG CCAGCTGCGC
AACCTCGAGG ACCGGCTCAA GGTCAAGGTC GTCGACCGGA CCGCCCTGAT CCTCGACATC
TTCGCCCAGC ACGCGAAGTC CAAGGAGGGC CAGGCGCAGG TCGAGCTGGC CCAGCTCAAC
TACCTCAAGC AGCGCCTGCG CGGCTGGGGT GGCAACCTCT CGCGCCAGGT CGGCGGTCGC
GCCGCGGGTG GCGTCGGCAT CGGCGGCCGC GGCCCCGGTG AGACCAAGAT CGAGACCGAC
CGCCGCCGGA TCAACACCAA GATCGCCAAG CTCCGCCGCG AGCTGAAGGA GATGAAGGGG
ACCCGCGACA CCAAGCGCCA GGAGCGGCGC CGCCACCACA TCCCCAGCGT CTCGATCGCC
GGCTACACCA ACGCCGGCAA GTCCTCGCTG CTCAACCGGC TCACCGACGC CGGAGTCCTC
GTGGAGGATG CGCTGTTCGC GACGCTCGAC CCGACGACGC GTCGTACGAC GACCGCCGAC
GGGCGGGTCT ACACGATGAG CGACACCGTC GGCTTCGTGC GACACCTGCC GCACCAGCTG
GTCGAGGCGT TCCGCTCGAC GCTGGAGGAG GTCGCCGACG CCGACCTGAT CCTGCACGTG
GTCGACGGCT CGCACCCCGA CCCGGAGGGC CAGCTCACCG CGGTCCGCGA GGTGTTCGCC
GAGATCGGCG CCTCCCAGGT GCCCGAGCTC GTGGTCATCA ACAAGGCCGA CGCCGCCGAC
CCGATGGTGA TCGCGCGGCT GCGCCAGCGC GAGCCGCACT CCGTGGTCGT GTCGGCGAAG
ACCGGCGAGG GCGTCGCCGA GGCGCTGCGG GTGATCGAGG GTGAGCTGCC CCGCCCCGGC
GTGGAGTTCA AGGCGTTGCT GCCCTACGAG CGCGGTGACC TGATCAACCG GCTGCACCAG
CACGGCGAGA TCGACTCGAT GGAGCACACC GGCGAGGGCA CCATCGTGGT CGGCCGGGCC
AACGAGGACC TGGCCGGCGA GCTGGCGGCG TACGCCGTCT GA
|
|---|
| Protein sequence | MTNAPDLNSF SLDDELAATE DWEDDDFRSG YVDEPDPEEP TTGDLDLAER HELRRVAGLR
TELEDITEVE YRQLRLERVV LVGVWTEGSV EDAENSMAEL ALLAETAGSE VLDAIYQRRQ
KPDPATYIGR GKVDGLREIV QATGADTVIC DGELAPSQLR NLEDRLKVKV VDRTALILDI
FAQHAKSKEG QAQVELAQLN YLKQRLRGWG GNLSRQVGGR AAGGVGIGGR GPGETKIETD
RRRINTKIAK LRRELKEMKG TRDTKRQERR RHHIPSVSIA GYTNAGKSSL LNRLTDAGVL
VEDALFATLD PTTRRTTTAD GRVYTMSDTV GFVRHLPHQL VEAFRSTLEE VADADLILHV
VDGSHPDPEG QLTAVREVFA EIGASQVPEL VVINKADAAD PMVIARLRQR EPHSVVVSAK
TGEGVAEALR VIEGELPRPG VEFKALLPYE RGDLINRLHQ HGEIDSMEHT GEGTIVVGRA
NEDLAGELAA YAV
|
|---|
| |