| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3654 |
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| Symbol | |
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| ID | 4595766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | + |
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| Start bp | 3878992 |
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| End bp | 3879510 |
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| Gene Length | 519 bp |
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| Protein Length | 172 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 639778262 |
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| Product | sigma-70, region 4 type 2 |
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| Protein accession | YP_924841 |
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| Protein GI | 119717876 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02983] RNA polymerase sigma-70 factor, sigma-E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0480058 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACGGAGC GGGACGCCGA CTTCACGGCG TACCTCCAGG CCCGCCTGGG GCGCCTGCTC
CGGATCGCGT ACCTGCTCAC CGGGGACCAG CACCAGGCCG AGGACCTGCT GCAGACCTCG
CTGGCCAAGC TCTACCTGTC GTGGGACAGG GTCCGCGACC GCGGCTCGGT GGACGCCTAC
GTCCGCCGGA TCATGGTCAA CGAGAACAAC TCGCTGTGGC GTCGCGGCTG GAAGCGGCGC
GAGGCGCCGA CCGACGTGGT GCCCGAGGGC AGTCCCGTCC ACGACGCGTA CGACGAGGGT
CTCGGCGCGG CGGTGTGGGC GGTCGTCCAG ACGCTGCCCC GCAAGGCCCG GGCCGTGGTC
GTGCTGCGCT ACTACGAGCA GCTGTCCGAG GCCGAGACCG CCGACGTGCT CGGCATCTCC
GTCGGCACCG TGAAGTCACA GACCAGCCGG GCGCTCGCCG CGCTGCGCGA GCGAACGCCC
GCCGACCTGA GCCCGACGCA CCGGGAGGAG GAGCGATGA
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| Protein sequence | MTERDADFTA YLQARLGRLL RIAYLLTGDQ HQAEDLLQTS LAKLYLSWDR VRDRGSVDAY
VRRIMVNENN SLWRRGWKRR EAPTDVVPEG SPVHDAYDEG LGAAVWAVVQ TLPRKARAVV
VLRYYEQLSE AETADVLGIS VGTVKSQTSR ALAALRERTP ADLSPTHREE ER
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