Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3632 |
Symbol | |
ID | 4597455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3851093 |
End bp | 3852805 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639778240 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_924819 |
Protein GI | 119717854 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTTCG ACTACGACGT GCTGGTGGTG GGGTCCGGCT TCGGCGGGTC CGTGACGGCG CTGCGCCTGA CCGAGAAGGG CTACCGGGTC GGCGTGATCG AGGCGGGCGC CCGGTTCGAG GACCAGGACC TGCCCGAGAC CTCCTTCGAG GTCTCGAAGT ACCTCTTCCG GCCCGAGATC GGCTGCTACG GCATCCAGCG CATCGACGCG CTCAAGGACT GCCTGATCGT CTCCGGGGCG GGCGTGGGCG GGGGGTCGCT GGTCTACGCG AACACCCTCT ACGAGCCGCT GCCGGCGTTC TACGCCGACG CCCAGTGGAG CCACATCACC GACTGGCGCG CCGAGCTGGC GCCGTACTAC GACCAGGCCA AGCGGATGCT GGGCGTCGTC GAGAACCCGC TCCGCACGCC CTCCGACGAG ATCATGGAGA AGGTGGCGAC CGAGATGGGC GTCGCCGACA CCTTCCACCC CACGCCGGTC GGGGTGTTCT TCGGCGGTCC CGGGGCGGGC ATGGGCCAGG CCGTGGACGA TCCGTTCTTC GGCGGCGCCG GGCCGGACCG GCGTACCTGC ATCGCCTGCG GCTCGTGCAT GACCGGCTGC CGGCACAACG CCAAGAACAC CCTGGTCAAG AACTACCTCT ACCTCGCCGA GCGCAACGGC GCGAAGGTGA TGCCGCTGAC CACGGTGACC CGGGTCCGCC CGCGCGAGGG CGGCGGGTAC GACGTGCACG TCCGCTACAC GAAGGCGAAG ATCGACCGGC GCTCGGTGCG GCGGGTGCTG AGCGCCGAGC AGGTCGTGTT CGCCGCGTCC GCGCTCGGCA CCCAGCGGCT GCTGCACAAG ATGAAGGACG AGGGGCACCT GCCCCGCCTC TCCGACCGCC TCGGTGAGCT GGCCCGGACC AACTCCGAGT CGATCGGCGG CGTGGTCGCG CCGGACCTGT CGGTCGACTA CAGCCAGGGC ATCGCGATCA CCAGCAGCTT CCACCCGGAC GCGAACACCC ACATCGAGCC GGTCCGCTAC GGACCGGGCA GCAACCTGAT GTCGTTGCTC CAGTCGGTGC TCACCGACGG TGACGGCGAC GAGCCGCGCT GGCGGACCTG GCTGCGCGAG GTGTGGCGCC AGCGCAAGCA GGTGCCGAAC CTCTACGACA TGAAGCACTG GTCCGAGCGC ACGATCATCG CGTTGGTGAT GCAGAGCGTG GACAACTCGA TCACCACCTA CACCAAGCGG ATCCCCGGCA CCCGCAAGCG CTACCTGACC TCCAAGCAGG GCCACGGCGA GCCGAACCCG ACCTGGATCC CGGCCGGCAA CGAGGCGATC CGGGCGATGG CCCGGATCAC CGGCGGCTTC CCCGGCAGTG CGGTCGGCGA CGCCTTCAAC ATGCCGCTGA CCGCCCACTT CCTGGGCGGC TGCCCGATCG GCGACTCCCG GGAGACCGGG GTGGTGGACC CCTACCAGCG GGTCTACGGG TACCCCGGGC TGCACATCGC CGACGGCTCG GCGATCTCGG CGAACCTCGG CGTGAACCCG TCGCTGACGA TCACCGCGCA GGCGGAGCGC GCCATGTCGT TCTGGCCCAA CAAGGGCGAG GCCGACCCGC GGCCCGACCT GGGCGCGGCG TACCAGCGGA TCCAGCCGGT CCGCCCCGCC GCCCCGGTGG TCCCCGACGA CGCGCCCGGG GCGCTGCGGC TGCCGATCGT CGGCGTCAGC TGA
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Protein sequence | MRFDYDVLVV GSGFGGSVTA LRLTEKGYRV GVIEAGARFE DQDLPETSFE VSKYLFRPEI GCYGIQRIDA LKDCLIVSGA GVGGGSLVYA NTLYEPLPAF YADAQWSHIT DWRAELAPYY DQAKRMLGVV ENPLRTPSDE IMEKVATEMG VADTFHPTPV GVFFGGPGAG MGQAVDDPFF GGAGPDRRTC IACGSCMTGC RHNAKNTLVK NYLYLAERNG AKVMPLTTVT RVRPREGGGY DVHVRYTKAK IDRRSVRRVL SAEQVVFAAS ALGTQRLLHK MKDEGHLPRL SDRLGELART NSESIGGVVA PDLSVDYSQG IAITSSFHPD ANTHIEPVRY GPGSNLMSLL QSVLTDGDGD EPRWRTWLRE VWRQRKQVPN LYDMKHWSER TIIALVMQSV DNSITTYTKR IPGTRKRYLT SKQGHGEPNP TWIPAGNEAI RAMARITGGF PGSAVGDAFN MPLTAHFLGG CPIGDSRETG VVDPYQRVYG YPGLHIADGS AISANLGVNP SLTITAQAER AMSFWPNKGE ADPRPDLGAA YQRIQPVRPA APVVPDDAPG ALRLPIVGVS
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