Gene Noca_3613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3613 
Symbol 
ID4599416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3829380 
End bp3830528 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content68% 
IMG OID639778221 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_924800 
Protein GI119717835 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGC AGCCGACGAT TCTCGAGCAG GAGCACGAGG ACTTCCGCGG CACCGTCCGC 
GCCTTCCTGG AGAAGGAGGT CGTCCCGCAC CACGAGCAGT GGGAGAAGGA CGGCCAGGTC
AGCCGCGAGG TCTGGCGCAA GGCCGGCGAG CACGGCCTGC TGTGCTTCGA CGTCGAGGAG
GAGTACGGCG GCGCCGGGGT CAAGGACTTC CGCTACAACA TGGTGGTCGC CGAGGAGATG
TGCCGGGTCG GCGCGAGCGG CCCCGGCTTC CCGGTGCACA CCGACATCAT CGTCCCCTAC
ATCAGCCAGC TCGGGACGCC CGAGCAGAAG GCCCGCTGGC TGCCCGGCCT GGTCAGCGGC
GAGCTCATCT CCGCGATCGC GATGACCGAG CCGGGCGCCG GCTCGGACCT GCAGGGCATC
AAGACCACGG CGATCGACAA GGGCGACCAC TACGTCCTGA ACGGCTCGAA GACGTTCATC
AGCAACGGCA TCCTCTCCGA CCTCGTGATC GTCGTGTGCC GCACCGACCC CGACGCCGGC
CACCAGGGCA TCAGCCTGCT CGTGGTCGAG CGCGGGATGA AGGGCTTCGA GCGCGGCCGC
AACCTGGACA AGATGGGGAT GAAGGCCCAG GACACCGCCG AGCTGTTCTT CGACGAGGTC
GAGGTCCCCA AGGAGAACCT GCTCGGCGCC GAGGGCTCCG GCTTCGTCTC GCTGATGGTC
AACCTCGCCC AGGAGCGGAT CTCGATCGCC GTGATGGCGG TCGCCGCCAT CGAGCAGATG
CTCGAGGTCT CGCTGTCCTA CGCCAAGGAC CGGCAGGCCT TCGGCAAGCC GATCGGCAGC
TTCCAGCACA ACCGCTTCCT GCTCGCCGAG ATGGCCACCG ACGCCCACAT CGCCCGGGTG
TTCGTCAACG ACTGCGTGCT CAAGCTCAAC GCCGGCCAGG TCGACCCCGC CCTCGCCTCG
ATGGCGAAGT GGTGGACCAC CGAGACCCAG AAGAAGGTCG TCGACCAGGC CGTCCAGCTG
CACGGCGGCT ACGGCTACAT GATGGAGTAC CCCGTCGCCC GGGCCTACGT CGACAGCCGG
ATCCAGACCA TCTACGGCGG CACCACCGAG ATCCAGAAGG AGATCATCGG CCGCTCGCTC
GGCATCTGA
 
Protein sequence
MPEQPTILEQ EHEDFRGTVR AFLEKEVVPH HEQWEKDGQV SREVWRKAGE HGLLCFDVEE 
EYGGAGVKDF RYNMVVAEEM CRVGASGPGF PVHTDIIVPY ISQLGTPEQK ARWLPGLVSG
ELISAIAMTE PGAGSDLQGI KTTAIDKGDH YVLNGSKTFI SNGILSDLVI VVCRTDPDAG
HQGISLLVVE RGMKGFERGR NLDKMGMKAQ DTAELFFDEV EVPKENLLGA EGSGFVSLMV
NLAQERISIA VMAVAAIEQM LEVSLSYAKD RQAFGKPIGS FQHNRFLLAE MATDAHIARV
FVNDCVLKLN AGQVDPALAS MAKWWTTETQ KKVVDQAVQL HGGYGYMMEY PVARAYVDSR
IQTIYGGTTE IQKEIIGRSL GI