| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3575 |
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| Symbol | |
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| ID | 4599454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3792669 |
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| End bp | 3794882 |
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| Gene Length | 2214 bp |
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| Protein Length | 737 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 639778183 |
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| Product | isocitrate dehydrogenase, NADP-dependent |
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| Protein accession | YP_924762 |
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| Protein GI | 119717797 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2838] Monomeric isocitrate dehydrogenase |
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| TIGRFAM ID | [TIGR00178] isocitrate dehydrogenase, NADP-dependent, monomeric type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.115962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCACGA TCATCTACAC CCACACCGAC GAGGCGCCGC TGCTCGCGAC GTACTCGTTC
CTGCCGATCA TCCAGGCGTA CGCCGCGAAG GCCGGTGTGG AGGTGGAGAC CCGCGACATC
TCCCTCGCGG GCCGGATCAT CGCCCAGTTC CCCGACCGCC TGACCGCCGA GCAGCGGATC
GACGACGCGC TGGCCGAGCT CGGCGAGCTG GCCAAGCGGC CCGAGGCCAA CATCATCAAG
CTGCCGAACG TCTCCGCCTC CGTCCCGCAG CTCAAGACCG CGATCAAGGA GCTCCAGGAG
CAGGGCTACG ACCTGCCCGA CTACCCCGAG AACCCGCAGA CCGACGAGGA CCGGGACGTC
CGGGCGCGCT ACGACAAGGT CAAGGGCTCG GCGGTCAACC CGGTGCTGCG GCAGGGCAAC
TCCGACCGCC GTGCGCCCGC GTCGGTCAAG CAGTACGCGA AGGCCTACCC GCATCGGATG
GGCGCGTGGA GCACCGACTC CAAGACCAAC GTCGCCACCA TGGGCGAGCA CGACTTCAAG
ACCAACGAGA AGTCCGTGGT GCTCGCCGCC GACGACACCC TGCGCATCGA GCTCGAGGCC
GCGGACGGCA CCACGACCGT GCTCAAGGAG TCACTGCCGG TCCTGGCCGG TGAGGTCGTG
GACGCCACGA CCCTCCAGGT CGCCCACCTG CACGGCTTCC TGCGCAACGC GATCGCCCGC
GCGAAGAGCG AGGGCGTGCT GTTCAGCGTC CACCTCAAGG CGACGATGAT GAAGGTCTCC
GACCCGATCA TCTTCGGCCA TGTGGTGCGG GCCTTCTTCG AGCCGGTCTT CGCGAAGTAC
GGCGACGACC TCGCCGCGGC CGGCCTCAGT CCGAACGACG GCCTCGGCGC CATCCTCGGC
GGGCTGGACA AGCTCTCGAA CGGCGCCGAG ATCAAGGCGG CCTTCGAGCA GGCGATCGCC
GACGGCCCCG CGCTCGCGAT GGTCGACTCC GACCGCGGTA TCACCAACCT GCACGTGCCC
TCCGACGTGA TCGTGGACGC CTCGATGCCG GCGATGATCC GCACCTCCGG CCACATGTGG
GGCCCCGACG GCCAGGAGGC CGACACCCTG GCCGTGATCC CGGACTCCTC CTACGCCGGG
GTCTACCAGA CGGTGATCGA CGACTGCCGC GAGCACGGCG CGTTCGACCC GGCGACGATG
GGCTCGGTGC CGAACGTCGG CCTGATGGCC CAGGCGGCCG AGGAGTACGG CTCCCACGAC
AAGACCTTCG AGATCCCCAC CGACGGCACC GTGCGGGTCC TCGACTCCTC GGGCGCGGTC
CTCATCGAGC ACGACGTCGC GGCCGGCGAC ATCTGGCGCG CCTGCCAGAC CAAGGACGCG
CCGATCCGCG ACTGGGTCAA GCTCGCCGTG ACCCGCGCCC GCGCGACCGG TGCGCCGGCG
GTCTTCTGGC TAGACGAGAC CCGCGCCCAC GACGCCAGCC TGATCACGAA GGTCAACGCC
TACCTGCCCG AGCACGACAC CGAGGGCCTG GACATCAAGA TCCTGGCGCC CGAGCTGGCG
ACGGCGTACT CCCTCGAGCG GATCCGCCGT GGCGAGGACA CCATCTCGGT GACCGGCAAC
GTGCTGCGCG ACTACAACAC CGACCTGTTC CCGATCCTCG AGCTCGGCAC CTCCGCGAAG
ATGCTCTCGG TCGTGCCGCT GATGGCCGGC GGCGGGCTGT TCGAGACCGG CGCCGGGGGC
TCGGCGCCCA AGCACGTCCA GCAGCTGCTC AAGGAGAACT ACCTGCGCTG GGACAGCCTC
GGTGAGTTCT TCGCGCTCGC GGCGTCCTTC GAGCACCTCT CCGGGTACGC CGCCAACCCG
GGAGCCCAGG TCCTCGCCGA CACCCTGGAC CGCGCGACGG GCACTTTCCT GGACCGGGAC
AAGTCGCCGA CCCGCAAGCT GGGCGGCATC GACAACCGCG GCTCGCACTT CTACCTGGCG
CTGTATTGGG CGCAGGAGCT GGCGGCCCAG ACCGAGGACG CCGACCTCGC GGCCGCGTTC
AAGCCGCTGG CCGAGACGCT CGCCGCGCAG GAGCAGCAGA TCGTCGAGGA GCTGCTCGCC
GTGCAGGGCT CTCCGGCCGA CATCGGCGGC TACTACCGGC CCGACGACGC CTTGGCGTCC
GCGGTGATGC GGCCCTCGGC GACCCTGAAC GAGGCGCTGG CCTCCCTTGG CTGA
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| Protein sequence | MATIIYTHTD EAPLLATYSF LPIIQAYAAK AGVEVETRDI SLAGRIIAQF PDRLTAEQRI
DDALAELGEL AKRPEANIIK LPNVSASVPQ LKTAIKELQE QGYDLPDYPE NPQTDEDRDV
RARYDKVKGS AVNPVLRQGN SDRRAPASVK QYAKAYPHRM GAWSTDSKTN VATMGEHDFK
TNEKSVVLAA DDTLRIELEA ADGTTTVLKE SLPVLAGEVV DATTLQVAHL HGFLRNAIAR
AKSEGVLFSV HLKATMMKVS DPIIFGHVVR AFFEPVFAKY GDDLAAAGLS PNDGLGAILG
GLDKLSNGAE IKAAFEQAIA DGPALAMVDS DRGITNLHVP SDVIVDASMP AMIRTSGHMW
GPDGQEADTL AVIPDSSYAG VYQTVIDDCR EHGAFDPATM GSVPNVGLMA QAAEEYGSHD
KTFEIPTDGT VRVLDSSGAV LIEHDVAAGD IWRACQTKDA PIRDWVKLAV TRARATGAPA
VFWLDETRAH DASLITKVNA YLPEHDTEGL DIKILAPELA TAYSLERIRR GEDTISVTGN
VLRDYNTDLF PILELGTSAK MLSVVPLMAG GGLFETGAGG SAPKHVQQLL KENYLRWDSL
GEFFALAASF EHLSGYAANP GAQVLADTLD RATGTFLDRD KSPTRKLGGI DNRGSHFYLA
LYWAQELAAQ TEDADLAAAF KPLAETLAAQ EQQIVEELLA VQGSPADIGG YYRPDDALAS
AVMRPSATLN EALASLG
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