Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3514 |
Symbol | |
ID | 4595696 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3724989 |
End bp | 3726074 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 639778122 |
Product | benzoate transporter |
Protein accession | YP_924701 |
Protein GI | 119717736 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTCGTCC TGACCGGGCT CGTCGCGATC GGCGCGACGG CGGCCGAGGC CGCGTCCGGC CTGCTCGTCC TGTGCGTGAC CCAGGCGCTC GGCATGCTCT GGCTCGCGGT CCGGCACCGC ATCCCGATCA CGCTCGCGTG GTCGACCCCG GGGGCGGCCC TGCTGCTGTC CACCGGCACG GTCTCCGGCG GCTGGCCGGC CGCGGTCGGG GCGTTCGTGG TGACCGGCGT CCTGATCGTG CTCACCGGCC TGGTCCCGGC GCTCGGCGAG CTGATCGCCC GGATCCCGAC CTCGCTGGCG CGCGCGATGC TCGCCGGCGT GCTGCTGCCG ATCTGCCTGG AGCCGGTGAC CGGCCTGGCC GACTCGCCGA CGTACGTCGG TCCGGTCGTG CTCGCCTGGC TGGTTATGCA CCGGGTCTCC CGCCGGTGGG CGGTGCCGGT CGCGCTCGCG GTCGCCCTGG TGGTGGTGCT CGTGGCGGCC GGCTCCTCGG TCTCGGCCCC TGACCTGGTC CCGGCGCTCG CCTGGACCAC GCCGCACTGG ACGGTGTCGA GCGCGATGAG CCTCGCCGTA CCGCTCTACA TCGTGACCAT GGCCTCGCAG AACGTCCCCG GCGTCGCGGT CACGTCCAGC TTCGGCTACC AGATCCCGTG GCGCGAGACG ATGACGGTCA CCGGCGTCGG CACCCTCGCC GGCGCGCCGT TCGGCGGGCA TGCGATCAAC CTGGCGGCGA TCACGGCGGC GCTCGCGGCG GGCCCCGCCG CGGGCGAGGA CCGCTCCCGA CGCTGGATCG CGTGCGTCAG CGCGTCGGGC ACCTACCTGG TGCTCGCGCT CGGCTGCGGG GCGCTCACCA CCCTGGTCGC CGCCGCGCCC GGTGACGTCA TGCAGGCCGC CGCCGGCCTC GCGCTGCTCG GGACGCTCGG CGCCGCCCTG GCCGGCGCCC TCGACGACGA GGGCGGTCGG GAGGCCGTCG TCGTGTGCTT CCTCGTCGCC GCCTCCGGCA TCACCGTACT CGGCATCGGC GCGGCCTTCT GGGCGCTGGT CGCCGGGCTG GTGCTCCGCC CGGTGCTCAG CGAGCGGCGA CCCTGA
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Protein sequence | MVVLTGLVAI GATAAEAASG LLVLCVTQAL GMLWLAVRHR IPITLAWSTP GAALLLSTGT VSGGWPAAVG AFVVTGVLIV LTGLVPALGE LIARIPTSLA RAMLAGVLLP ICLEPVTGLA DSPTYVGPVV LAWLVMHRVS RRWAVPVALA VALVVVLVAA GSSVSAPDLV PALAWTTPHW TVSSAMSLAV PLYIVTMASQ NVPGVAVTSS FGYQIPWRET MTVTGVGTLA GAPFGGHAIN LAAITAALAA GPAAGEDRSR RWIACVSASG TYLVLALGCG ALTTLVAAAP GDVMQAAAGL ALLGTLGAAL AGALDDEGGR EAVVVCFLVA ASGITVLGIG AAFWALVAGL VLRPVLSERR P
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