Gene Noca_3441 details

Gene Information

• Locus tag: Noca_3441
• ID: 4597257
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardioides sp. JS614
• Kingdom: Bacteria
• Replicon accession: NC_008699
• Strand: +
• Start bp: 3648331
• End bp: 3648978
• Gene Length: 648 bp
• Protein Length: 215 aa
• Translation table: 11
• GC content: 71%
• IMG OID: 639778047
• Product: TetR family transcriptional regulator
• Protein accession: YP_924628
• Protein GI: 119717663
• COG category: [K] Transcription
• COG ID: [COG1309] Transcriptional regulator

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCCCGA TCGAGCGCCC CCGGGTCGAG GGCGACCGTG AGCAGGAGAT CCTCGACGCG 
ACGTTGGAGG TGCTCGCCGA CGTCGGCTAC GACCGGCTCA CGATGGACGC CGTCGCCGCC 
CGGGCCAAGG CGTCCAAGGC CACGCTGTAC CGGCGCTGGA ACAACAAGGT CAGCCTGGTG 
ATCGAGGCGC TGCACTCCGC CAAGGGACCG GCCGAGCTCC CCGACACCGG GACCCTGCGC 
GGCGACCTGC AGGGAGTCTT CTGCGGGATG GGCGGCCTCG TGGACCCGCA GAGCGTGGCG 
ACGTTCGCGA GCGTGCTCAC CGCCATCGCC CGCGACGCCG ACTTCGCCGA GGCCTTCCGC 
CGCGAGGTGG TCGGCCCCAA GATCGCGGTC TCCCAGGAGA TCTGGAGGCG CGCTCGCGAG 
CGCGGCGAGG TCTGCGCCGA GGCCGACCTC TCCCTGCTCG AGCCGGCCCT GGCCGGCATC 
GTCCTGCACC GCGTCTTCGT GATGGGCGAA CAGCCCGACG AGGACCTGAT CACCCGGGTG 
ATCGACCAGA TCATCCTGCC GGCCGCCACC TGTTGTGCGG TCCCGGCCAC GACGGACCCG 
TCCCCCTCCC CGTCCCACAA GGACTCCCAC AAGGAACAGG AAGACTGA 

 

Protein sequence

MTPIERPRVE GDREQEILDA TLEVLADVGY DRLTMDAVAA RAKASKATLY RRWNNKVSLV 
IEALHSAKGP AELPDTGTLR GDLQGVFCGM GGLVDPQSVA TFASVLTAIA RDADFAEAFR 
REVVGPKIAV SQEIWRRARE RGEVCAEADL SLLEPALAGI VLHRVFVMGE QPDEDLITRV 
IDQIILPAAT CCAVPATTDP SPSPSHKDSH KEQED