Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3425 |
Symbol | |
ID | 4597241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | + |
Start bp | 3629522 |
End bp | 3630400 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639778031 |
Product | hypothetical protein |
Protein accession | YP_924612 |
Protein GI | 119717647 |
COG category | [R] General function prediction only |
COG ID | [COG5006] Predicted permease, DMT superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.39788 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACCGACC CGAACTCATC GCGCGGGCTG GTCTCCCCCG TCTCACCGAT CTGGCTGGTG CTGATCGGCA TCCTGTCGGT GCAGTTCGGC GCCGGCGTCG CCAAGAGCCT GTTCGACGAG GTCGCGCCGA CCACCCTCGT GTGGCTGCGG CTGGTCACCA GCGCGGTCGT GCTGCTCGCG CTCGCGCGGC CGGTGCTGCG CGGCCGGTCC CGGGCGGACT GGCTGGTGGT GCTCGGGTTC GGCGCCAGCC TCGGGGTGAT GAACTGGGCG ATCTACCAGG CGTTCGCGCG GATCCCGCTC GGGGTCGCGG TGACCCTCGA GTTCGTCGGC CCGCTCACCC TCGCCGTGCT CGGCTCCCGC CGCGCCCGCG ACCTGCTGTG GGTGCTGCTC GCGGCCATCG GGGTCGCGCT GCTCGGCCTA CGCGACGGCG ACCTGACCCT GGCGGGCGTG CTGTTCGCGT TGCTCGCCGG CGCCATGTGG GCGTCGTACA TCCTGTTGAG CGCGCAGACC GGGCGCCGAT GGCCCGGCTT CGACGGGCTC GCCCTCGCCT CGGTGGTCGC GACCGCGCTG CTGACGCCCT TCGCCGTCGG GGTCGGCGGG TCGGACCTGC TGGACCCGCG GATCCTCGCG CTCGGCGCGG TCGTCGGCCT GCTCAGCTCG GTGGTCCCCT ACAGCTGCGA GCTGGTCGCG CTCCGCTCGC TGCGGCCCTC GGTGTTCTCG GTGCTGATGA GCCTGGAGCC CGCCGCCGCG GCGCTCGCCG GCATCGTCGT CCTCGACGAG CTGCTCAGCG CCGAGCAGTG GATCGCCCTG GTGTGCGTGG TCATCGCCTC GGTCGGCGCC ACCCGCTCCG CACCGACGGC GGCACCGGCA CCGGACTGA
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Protein sequence | MTDPNSSRGL VSPVSPIWLV LIGILSVQFG AGVAKSLFDE VAPTTLVWLR LVTSAVVLLA LARPVLRGRS RADWLVVLGF GASLGVMNWA IYQAFARIPL GVAVTLEFVG PLTLAVLGSR RARDLLWVLL AAIGVALLGL RDGDLTLAGV LFALLAGAMW ASYILLSAQT GRRWPGFDGL ALASVVATAL LTPFAVGVGG SDLLDPRILA LGAVVGLLSS VVPYSCELVA LRSLRPSVFS VLMSLEPAAA ALAGIVVLDE LLSAEQWIAL VCVVIASVGA TRSAPTAAPA PD
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