Gene Noca_3347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3347 
Symbol 
ID4598745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand+ 
Start bp3550396 
End bp3550977 
Gene Length582 bp 
Protein Length193 aa 
Translation table11 
GC content72% 
IMG OID639777955 
Productpentapeptide repeat-containing protein 
Protein accessionYP_924536 
Protein GI119717571 
COG category[S] Function unknown 
COG ID[COG1357] Uncharacterized low-complexity proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAGG ACCTCCGCGA CCTGGACTGG TACGCCGAGG ACCTCGGCGC GGTCTCCTAC 
GCCGGCGCCA CATTCACCGA CGTCGACCTG ACCGAGTGCA CCACCAAGGG CGCGACCTTC 
GAGAGCTGCA CCTTCCACAA CTGCCGCTTC AACTCCTCCA CCCACATCGC GACCGCCTTC 
GTGGGCTGCG ACTTCCGCCG CACCAGCTTC TTCGACGCGA TGCTCGACGG GTGCAAGCTC 
ACGGGCTCGA CGTTCGCCCA ATGCGTGCTG CGGCCGCTGT CCGTGCGCGG CGGCCAGTGG 
CTCGGCGTCT CGATGCGGGG CACCAACCTC TCCGGCCTGG TGCTCGACGA CCTCGACCTG 
CGCGAGGCGG ACCTGTCGAT GTGCGACCTC ACCGCCAGCT CGCTGCGCGG CGCCCGGCTC 
GCCGGGGCGA CCCTGCGCGA GACGGTCCTG ACCGAGGCGG ACCTGCGCGG CGCCGATCTC 
GCCGGCGTCG ACCTCAGGGT CGCCACCCTG CGCGGCACCA GGCTGGACCT CGCCGGCGCC 
GTCCAGCTCG CCGAGCAGCA CGGCGCGCTC GTCGAGCCGT AG
 
Protein sequence
MSEDLRDLDW YAEDLGAVSY AGATFTDVDL TECTTKGATF ESCTFHNCRF NSSTHIATAF 
VGCDFRRTSF FDAMLDGCKL TGSTFAQCVL RPLSVRGGQW LGVSMRGTNL SGLVLDDLDL 
READLSMCDL TASSLRGARL AGATLRETVL TEADLRGADL AGVDLRVATL RGTRLDLAGA 
VQLAEQHGAL VEP