| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3337 |
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| Symbol | |
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| ID | 4600231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3542411 |
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| End bp | 3543220 |
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| Gene Length | 810 bp |
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| Protein Length | 269 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 639777945 |
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| Product | 5-carboxymethyl-2-hydroxymuconate delta-isomerase |
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| Protein accession | YP_924526 |
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| Protein GI | 119717561 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0281372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCGCATCG CAAGGTTCAC CACGGGCGAA GACCCGTTGT ACGGCGTGGT CACGGGCGAG
CTCGACGAGT TCGGGCAGCC GGACCCCGAC AGCGTCGTCG TGGCCCTGGC CGGCGACCCG
CTCTACGTCG GCGTCAAGCT GCTCGACCAG GAGCACCGGC TCGAGGACGT GCGACTGCTC
GCGCCGGTGC TGCCGCGCAG CAAGGTCGTC GGGATCGGCC GCAACTACGC GGCGCACGCG
GCGGAGCTGG GCAACGACCT ACCCACCGAG CCGCTGATGT TCCTCAAGCC GAACACCAGC
GTGATCGGCC CGGGCGACCC GATCTTCTAC CCGCCGCAGA CGCAGAACCT GCACTACGAG
GGCGAGCTCG CCGTCGTGAT CGGCCGGATC TGCCGCGACG TACCTCCCGA GCAGGCCACC
GACGTGATCC ACGGCTACAC GATCGGCAAC GACGTGACCG CGCGGGACCT GCAGCGCAGC
GACGTGCAGT TCACCCGGGC CAAGGGCTTC GACTCGTTCT GCCCGCTGGG GCCGTGGATC
GAGACCGACC TCGACCCGCA CGACTTCGCG GAGGGCCGCA GCGTCCAGAC GCACCTGAAC
GGCGACCTGG TCCAGGACGG CTCGACCAAG GACCTGATCT TCGACATCCC GACCCTGATC
GCGTACGTGT CCAGCGTGAT GACGCTGCTC CCCGGTGACG TCATCCTCAC CGGCACCCCC
GAGGGCGTCG GCCCCATGGA CGTCGGCGAC GAGGTCGAGG TCTCGATCGC CGGACTCGGC
ACTCTCACGA ACCCCGTCAA GGCAAGGTGA
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| Protein sequence | MRIARFTTGE DPLYGVVTGE LDEFGQPDPD SVVVALAGDP LYVGVKLLDQ EHRLEDVRLL
APVLPRSKVV GIGRNYAAHA AELGNDLPTE PLMFLKPNTS VIGPGDPIFY PPQTQNLHYE
GELAVVIGRI CRDVPPEQAT DVIHGYTIGN DVTARDLQRS DVQFTRAKGF DSFCPLGPWI
ETDLDPHDFA EGRSVQTHLN GDLVQDGSTK DLIFDIPTLI AYVSSVMTLL PGDVILTGTP
EGVGPMDVGD EVEVSIAGLG TLTNPVKAR
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