Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3266 |
Symbol | |
ID | 4599128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3467498 |
End bp | 3469069 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639777872 |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_924455 |
Protein GI | 119717490 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0903561 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGTTCGCCA CACTCTCCGA CCGGCTCGCC GACACCTTCA AGAACCTCCG GGGGAAGGGT CGGCTCTCCG AGGCCGACAT CGACGCCACC GCGCGCGAGA TCCGGATCGC CCTGCTCGAG GCCGACGTCG CGCTGCCGGT GGTCAAGGAG TTCGTCGGCG CCGTCAAGGA GCGCGCTCGC GGCGAGGAGG TCAGCCAGGC GCTGAACCCG GCCCAGCAGG TCGTCAAGAT CGTCAACGAG GAGCTCGTGG CGATCCTCGG CGGGGAGGCT CGGCGGCTGC GCTACGCCAA GACCGGCCCG ACGGTCATCA TGCTCGCCGG CCTCCAGGGC GCCGGCAAGA CGACGCTGGC GGCCAAGCTC GCGCTCTGGC TCAAGGAGCA GGGCAAGAGC CCGCTGCTGG TCGCCGCCGA CCTCCAGCGC CCGAACGCGG TCAACCAGCT CCAGGTCAAC GGCGAACGCG CCGGCGTACC CGTCTTCGCG CCCGAGCCCG GGAACGGCGT CGGGGACCCG GTCGGCGTGG CCCGGGCCTC GATCGAGGAG GCCAAGCGCA CCCTCCACGA CGTGGTCATC GTCGACACCG CCGGCCGCCT CGGCGTCGAC GCCGAGATGA TGCAACAGGC CGCGGACATC CGCGACGCGG TCCAGCCCGA CGAGGTGCTC TTCGTCGTCG ACGCGATGAT CGGCCAGGAC GCCGTCGTGA CGGCGCAGGC GTTCCTCGAC GGCGTCGGGT ACGACGGCGT GGTGCTCACC AAGCTCGACG GTGACGCCCG CGGTGGCGCC GCGCTGTCGA TCGCCTCGAT CACCGGCAAG CCGGTGATGT TCGCGTCGGC CGGCGAGAAG CTCACCGACT TCGACCTCTT CCACCCCGAC CGGATGGCCT CGCGGATCCT CGACATGGGT GACGTGATGA CCCTGATCGA GCAGGCCGAG AAGGCCTTCG ACCAGGAGCA GGCCGCGAAG GCCGCGGCCA AGCTCACCGG GCAGGGCGGC GAGTTCACCC TCGACGACTT CCTCGAGCAG ATGCAGCAGG TCCGCAAGCT CGGCTCGATG TCGAAGATCA TGGGGATGCT TCCCGGGATG GGGCAGTTCC GCGAGCAGCT GGAGAACTTC GATGAGCGCG AGATCGACCG GATCCAGGCG ATCATCCAGT CGATGACTCC GGCCGAGCGG GCGAACCCGA AGATCATCGA CGGCTCCCGC CGGGCCCGCA TCGCGCGAGG CTCGGGACGC CAGGTCTCCG ACGTCAACCA GCTCGTGGAC CGGTTCTTCG AGGCCCGCAA GATGATGATG TCGCTGGCCA AGGGCGGCGG GATGCCGGGG ATGCCCGGGA TGGCCGGGAT GCCGGGGATG GGCAAGCGAG CCAAGGCCAA GCAGGCCCCG AAGAAGGGCA AGGGGGGCAA GCGGGTCTCC GGCAACCCTG CCAAGGCAGC CCAGCAGGCC GCGGCCGCGA AGGAGAAGGC CCAGGGCGCG CCCGCCAACC CGTTCGGGAC CCCCGACGGG GAGGAGCTGG ACTATGAGAA GGCGGCGGCC GCCCTCAACC TGCCCAAGGA CTTCTCCAAG TTCCTCAAAT AG
|
Protein sequence | MFATLSDRLA DTFKNLRGKG RLSEADIDAT AREIRIALLE ADVALPVVKE FVGAVKERAR GEEVSQALNP AQQVVKIVNE ELVAILGGEA RRLRYAKTGP TVIMLAGLQG AGKTTLAAKL ALWLKEQGKS PLLVAADLQR PNAVNQLQVN GERAGVPVFA PEPGNGVGDP VGVARASIEE AKRTLHDVVI VDTAGRLGVD AEMMQQAADI RDAVQPDEVL FVVDAMIGQD AVVTAQAFLD GVGYDGVVLT KLDGDARGGA ALSIASITGK PVMFASAGEK LTDFDLFHPD RMASRILDMG DVMTLIEQAE KAFDQEQAAK AAAKLTGQGG EFTLDDFLEQ MQQVRKLGSM SKIMGMLPGM GQFREQLENF DEREIDRIQA IIQSMTPAER ANPKIIDGSR RARIARGSGR QVSDVNQLVD RFFEARKMMM SLAKGGGMPG MPGMAGMPGM GKRAKAKQAP KKGKGGKRVS GNPAKAAQQA AAAKEKAQGA PANPFGTPDG EELDYEKAAA ALNLPKDFSK FLK
|
| |