Gene Noca_3264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoca_3264 
Symbol 
ID4599126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardioides sp. JS614 
KingdomBacteria 
Replicon accessionNC_008699 
Strand
Start bp3465735 
End bp3466898 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content77% 
IMG OID639777870 
ProductROK family protein 
Protein accessionYP_924453 
Protein GI119717488 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.198191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGACCT CCAGCTCCCT CGAGCGCCTC CGGGACACCA ACCGGCGCTC GATCACCTCG 
CTGCTCGCGG CCGAGGGGCC GATGAGCCGC GCCGATCTGG TGCGCGGCAC CGGGCTGTCG
CGGACCACGG TCTCCAGCCT GGTGGGCGAC CTGATCACGA GCGGGCACAT CGTCGAGACC
GCGGACCGCG GCCGCCCGCA CAAGGGCGGC AGCGGCCGGC CGCCGCTCCT GGTCGCGCTC
AGCACGCCCG GCGGCGGCGT GGCCGGCGTG GACATCGGCC ACCGGCACGT CCGGGTCGCC
GTCGCCGACC GGGTGGGCAC GGTGCTGGCC GAGGAGACCG CCGACCTGGA CGTCGACGAG
GACGGGGCGG CCGCGCTGGA CCGGGCCGCC CGGATGGTCC GGCACGAGCT GCGCGGCGCC
GGGCTGGAGC TCGGCGACCT GCATGCGGTC GGCATGTGCG TGCCTGCTCC CCTCGACCGG
CGCTCGGCGA GCATCCGCAC CGGCATCCTG CCCGGCTGGC GCGAGCTCTC CCCCGCCGAG
GAGCTGCACC GGCGCCTGGG GGTTGCGGTG TTCGCCGACA ACGACGCGAA CCTCGGCGCC
CTGGCCGAGC TCGGGCAGGG CGCGGCGCGC GGCGCCGGGG ACCTCGTCTA CGTCAAGGTC
GCCAGCGGCC TCGGCGCCGG CATCGTGCTG GGCGGCCGGC TGCACCGGGG CGCCAGCGGC
ATCGCCGGGG AGCTGGGGCA CGTCCAGGTC GACGAGGACG GGCAGGTCTG CCGCTGTGGG
AACCGCGGCT GCCTCGAGAC CCTGGTGTCC GCGCCGCGCC TGCTGGCGCT GCTGCAGCCG
GCGTACGACG AGCCGCTCTC GGGCGAGCGG ATCCTCGCAC TGGACGAGGC CGGCGATGCC
GGGGTGCGCC GGGTGCTCAG CGACGCGGGT CGTGCCATCG GGCGCGCGCT CGCCGACCTG
TGCAACAACC TGAACCCGGA GGTCGTGGTC GTGGGCGGCT CACTCGGACG CTCGACGTCG
TTGGCGGACG GCATCCGCGC CGCCGTCGAC CGCTACGCCC AGCCCGAGAC CGCCGCGGCG
GTCCGCGTGG TCCCGGGTGC CCTGGGCGAC CGCGCCGAGC TCGTCGGTGC GGTGTCGTTG
GCGATCGCCC GGGTCAGCGT CTGA
 
Protein sequence
MATSSSLERL RDTNRRSITS LLAAEGPMSR ADLVRGTGLS RTTVSSLVGD LITSGHIVET 
ADRGRPHKGG SGRPPLLVAL STPGGGVAGV DIGHRHVRVA VADRVGTVLA EETADLDVDE
DGAAALDRAA RMVRHELRGA GLELGDLHAV GMCVPAPLDR RSASIRTGIL PGWRELSPAE
ELHRRLGVAV FADNDANLGA LAELGQGAAR GAGDLVYVKV ASGLGAGIVL GGRLHRGASG
IAGELGHVQV DEDGQVCRCG NRGCLETLVS APRLLALLQP AYDEPLSGER ILALDEAGDA
GVRRVLSDAG RAIGRALADL CNNLNPEVVV VGGSLGRSTS LADGIRAAVD RYAQPETAAA
VRVVPGALGD RAELVGAVSL AIARVSV