| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noca_3245 |
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| Symbol | |
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| ID | 4599183 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardioides sp. JS614 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008699 |
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| Strand | - |
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| Start bp | 3446958 |
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| End bp | 3447896 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 639777851 |
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| Product | phage integrase family protein |
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| Protein accession | YP_924434 |
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| Protein GI | 119717469 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.676462 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCGAGG AGGAGCAGTC GGCGCGGCTT CCCGAGGCGA TGGCCCGGGC GCTCGGCGAC
TACGAGCGTC ACCTCGCCGC CGAGCGGGAC CTGTCCGAGC ACACGGTGCG TGCGTACATC
GGGGATGTGG CCGGGCTCCT GGAGCATGCC AGCCGGCTCG GCCAGACCGA GCCCGGCGAC
CTCGACCTGC GGACCCTGCG GAGCTGGCTG GCCAAGCAGC AGACCATGGG CCGCTCCCGG
ACCACCCTCG CCCGTCGGGC TACCGCAGCG CGGGTGTTCA CCGCCTGGCT GGCTCGCACC
GGCCGCACTC CGCTGGACGC CGGCGCGAGC CTCGGTGCGC CCAAGGCGCA CCGGACGCTG
CCACCGGTGC TGCGCACCGA CGAAGCGGCC GACCTGGTCC GCGCGGCGGT CGAGCACGCC
GACGACGGCA GCCCGGTCGG TCTGCGCGAC GTGGCGATGC TCGAGCTGCT CTACGCGACC
GGCATCCGGG TGGGAGAGCT CGTCGGCCTC GACATCGACG ACCTGGACCG CGAGCGCAAC
GTGGTCCGGG TGCTCGGCAA GGGCCGCAAG GAGCGGACCG TTCCGTTCGG GCGGCCCGCC
GCCCGCGCCG TGGACTTCTG GCTCAAGCAC GGCCGGCCGC TGCTCGCGGT CGAGGGGAGC
GGCGCCGCGC TGTTCCTCGG CGCCCGCGGC CGCCGCATCG ACCAGCGCGC GGTCCGCACG
GTCGTGCACC GGCGCATCGC GGAGGTGCCG GGCGCGCCCG ACATCGGCCC GCACGGGTTG
CGGCACACCG CCGCCACGCA CCTGCTCGAG GGCGGCGCCG ACCTGCGCTC GGTGCAGGAG
CTGCTCGGCC ACGCCTCGCT TGCGACCACC CAGATCTACA CCCACGTCAG CACCGAGCGG
CTGCGGCGGG CCTACCAGCA GGCACACCCC AGAGCCTGA
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| Protein sequence | MSEEEQSARL PEAMARALGD YERHLAAERD LSEHTVRAYI GDVAGLLEHA SRLGQTEPGD
LDLRTLRSWL AKQQTMGRSR TTLARRATAA RVFTAWLART GRTPLDAGAS LGAPKAHRTL
PPVLRTDEAA DLVRAAVEHA DDGSPVGLRD VAMLELLYAT GIRVGELVGL DIDDLDRERN
VVRVLGKGRK ERTVPFGRPA ARAVDFWLKH GRPLLAVEGS GAALFLGARG RRIDQRAVRT
VVHRRIAEVP GAPDIGPHGL RHTAATHLLE GGADLRSVQE LLGHASLATT QIYTHVSTER
LRRAYQQAHP RA
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