Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noca_3006 |
Symbol | |
ID | 4596453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardioides sp. JS614 |
Kingdom | Bacteria |
Replicon accession | NC_008699 |
Strand | - |
Start bp | 3202076 |
End bp | 3204745 |
Gene Length | 2670 bp |
Protein Length | 889 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 639777611 |
Product | DNA polymerase I |
Protein accession | YP_924195 |
Protein GI | 119717230 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCGCC TCCTGCTCCT CGACGGCCAC TCGCTCGCGT ATCGCGCGTT CTTCGCGCTG CCGGTGGAGA ACTTCTCGAC CACGACCGGC CAGCACACCA ACGCGGTCTA CGGCTTCACC TCGATGCTGA TCAACGTGCT GCGCGACGAG CAGCCGACCC ACGTGGGCGT GGCGTTCGAC GTGTCCCGGC AGACCTTCCG GCTGGAGGAG TACGCCGACT ACAAGGCCAA GCGCAACAAG ACGCCGACCG AGTTCAGCAG CCAGCTGCCG CTGATCGAGG AGGTCCTCAA CGCGCTGCGG ATCCCGTTCC TGAAGAAGGA CGGCTACGAG GCCGACGACA TCATCGCCAC GCTGGTCACC CGCGCGCTCG AGGACCCCGA GATGGAGGTG CTGATCCTCA CCGGCGACCG TGACTCGCTC CAGCTGGTCA CCGACCGCTC GACCGTGCTC TACCCGATGC GGGGGGTCTC CGACCTGGCC CGGATGACGC CGGCAGCGGT CGAGGCCAAG TACGGCGTCC CGCCGGCGCG CTACCCCGAG CTCGCGGCGA TCGTGGGGGA GACCTCCGAC AACCTCCCGG GTGTGCCGGG GGTCGGCCAG GGCTACGCGG CGAAGTGGAT CAACCAGTTC GACGGCCTCG ACAACGTGAT CGCCCGCGCC GACGAGATCA CCGGCAAGAA GGGCGAGGCG CTGCGGGCCC ACCTCGGCGA CGTGATCCGC AACCGCCACC TCAACGCCCT CGTGTGCGAC CTCGAGCTCG ACCGGACCCC CGAGCAGCTC GCGGTGCAGC CGTGGGACCG CCACGAGGTG CACACGCTCT TCGACGGCCT CGAGTTCCGG GTGCTGCGCG ACCGCCTCTT CGAGACGCTC ACCTCGGAGG AGGAGATCGA CGACTCCGGC TTCGACGTCG CGATGAGCGT GCTGGGCGCC GGCGCGCTGG CGGCGTGGCT CGAGCAGCAC ACCGCCTCCG GCGAGCGGGT CGGCCTGCAC GTCGCGGGGC ACTGGAGCGC GGGCACCGGT GACGTGACGT CGTTGGCGCT GGCGACCACC GACGGCCTCG CGGCCTGGGT CGCCGCCGAC CAGCTCGACG TGGCCGACCA GACCGCGCTC GCCGGGTGGC TGGCCGATCC CAAGCGGCCC AAGGTGCTCC ACGACGCGAA GGGGCCGATG CTCGCCCTGG CCGCCTGGGG CCTGCCGCTG GCCGGCCTGG ACCGGGACAC CGCGCTCTCG GCGTACCTCG CCCGGCCCGA CCAGCGCTCC TACGACCTGG CGGACCTGAC CGTGCGCTAC CTCAAGCGTG AGCTCAAGCA GGGTGGAGCC GACGACGGCC AGCTCAGCCT CGACGGCCTG GACGACCGGA ACGCCGGCGA GATCGAGATG CTGCACGCCC GGGCCGTCCT CGACCTGGCC GCAGCGCTGG ACGACGAGCT CGAGGAGCGC GGCGGCACCC GCCTGCTCAA CGACATCGAG CTGCCGCTGG TCGACCTGCT CGCCAAGATG GAGCAGACCG GCATCGCCGT CGACACCGAC CACCTCGAGG CGCTGGAGAG CCACTTCGCC GCCGAGGTGC GCGACGCGGC CGAGCAGGCG TTCGGCGTGA TCGGCAAGGA GATCAACCTC GGCTCGCCCA AGCAGCTGCA GGCCGTGCTG TTCGACGAGC TCGGGATGCC GAAGACCAAG CGCACCAAGA CCGGCTACAC GACCGACGCG GACGCGCTCC AGGCGCTGTA CGTCAAGACC GAGCACCCGT TCCTGCTGCA CCTGCTGCGC CACCGCGACG TGTCCCGGCT GCGCCAGACG ATCGAGGGCC TGCTCAAGAC CGTCGCGGGC GACGGCCGCA TCCACACGAC GTTCAACCAG ACGATCGCCG CGACCGGCCG CCTGTCCAGC ACCGAACCCA ACCTCCAGAA CATCCCGATC CGCACCGAGG AGGGCCGCCG GATCCGCGAG GGCTTCGTGG TCGGTCCGGG GTACGAGTCG TTGATGACCG CCGACTACAG CCAGATCGAG ATGCGGATCA TGGCGCACCT GTCCGAGGAC GACCTGCTGA TCGAGGCGTT CAAGTCCGGT CGCGACTTCC ACTCGATCAC CGCCGCCCGG GTCTTCGACG TGCCGGCCGA CGACGTCACG GTCGAGATGC GGGCCAAGAT CAAGGCGATG AACTACGGCC TGGCCTACGG CCTGTCCGCG TTCGGCCTGG GCCAACAGCT CGGCATCGAG CCGAGCGAGG CCCGCGGGCT GATGGACGAG TACTTCCAGA CCTTCGGCGG GATCCGCGAC TACCTCGGCG GCGTCGTCGA GGAGGCCCGC AAGGCCGGGT TCACCGAGAC CATCTGGGGC CGTCGCCGCT ACCTGCCCGA CCTCACGAGC GACAACCGCC AGCGCCGCGA GATGGCCGAG CGGATGGCGC TGAACGCGCC GATCCAGGGC TCGGCCGCCG ACCTGATCAA GATCGCGATG CTCAACGTCG ACCGGGCGAT CGCCGCCGCC GGGCTGGCCT CGCGGATGCT GCTCCAGGTG CACGACGAGC TCGTGTTCGA GGTGGCGCCG GGGGAGCAGG AGCCGCTCGA GGTCCTGGTC CGCGAGCAGA TGGGCGCCGC CGCGGACCTC GCCGTACCCC TCGACGTGAG CGTGGGCTTC GGCCGCAGCT GGCACGAGGC GGCCCACTGA
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Protein sequence | MPRLLLLDGH SLAYRAFFAL PVENFSTTTG QHTNAVYGFT SMLINVLRDE QPTHVGVAFD VSRQTFRLEE YADYKAKRNK TPTEFSSQLP LIEEVLNALR IPFLKKDGYE ADDIIATLVT RALEDPEMEV LILTGDRDSL QLVTDRSTVL YPMRGVSDLA RMTPAAVEAK YGVPPARYPE LAAIVGETSD NLPGVPGVGQ GYAAKWINQF DGLDNVIARA DEITGKKGEA LRAHLGDVIR NRHLNALVCD LELDRTPEQL AVQPWDRHEV HTLFDGLEFR VLRDRLFETL TSEEEIDDSG FDVAMSVLGA GALAAWLEQH TASGERVGLH VAGHWSAGTG DVTSLALATT DGLAAWVAAD QLDVADQTAL AGWLADPKRP KVLHDAKGPM LALAAWGLPL AGLDRDTALS AYLARPDQRS YDLADLTVRY LKRELKQGGA DDGQLSLDGL DDRNAGEIEM LHARAVLDLA AALDDELEER GGTRLLNDIE LPLVDLLAKM EQTGIAVDTD HLEALESHFA AEVRDAAEQA FGVIGKEINL GSPKQLQAVL FDELGMPKTK RTKTGYTTDA DALQALYVKT EHPFLLHLLR HRDVSRLRQT IEGLLKTVAG DGRIHTTFNQ TIAATGRLSS TEPNLQNIPI RTEEGRRIRE GFVVGPGYES LMTADYSQIE MRIMAHLSED DLLIEAFKSG RDFHSITAAR VFDVPADDVT VEMRAKIKAM NYGLAYGLSA FGLGQQLGIE PSEARGLMDE YFQTFGGIRD YLGGVVEEAR KAGFTETIWG RRRYLPDLTS DNRQRREMAE RMALNAPIQG SAADLIKIAM LNVDRAIAAA GLASRMLLQV HDELVFEVAP GEQEPLEVLV REQMGAAADL AVPLDVSVGF GRSWHEAAH
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